RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SLC6A16Q9GZN6 736 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 EHD1Q9H4M9 534 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 NT5DC2Q9H857 520 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 ANKZF1Q9H8Y5 726 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 C14orf105Q9NVL8 296 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 C3orf18Q9UK00 162 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 DOCK10Q96BY6 2186 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 RP1L1Q8IWN7 2480 aaPredicted RBP14.56□□□□□ -0.08
VAPA-201ENST00000340541 BLACEA4D250 179 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 IDSB3KWA1 339 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 C4orf51C9J302 202 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 PEX12O00623 359 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 CCNT2O60583 730 aaKnown RBP14.56□□□□□ -0.08
VAPA-201ENST00000340541 KLHL41O60662 606 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 GALR3O60755 368 aaPredicted RBP14.56□□□□□ -0.08
VAPA-201ENST00000340541 DNAJB6O75190 326 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 SORBS2O94875 1100 aaKnown RBP14.56□□□□□ -0.08
VAPA-201ENST00000340541 KLHL18O94889 574 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 BMP10O95393 424 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 TBX6O95947 436 aaPredicted RBP14.56□□□□□ -0.08
VAPA-201ENST00000340541 B3GALT4O96024 378 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 IGHEP01854 428 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 SMIM10L1P0DMW3 83 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 PCDH1Q08174 1060 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 DOC2AQ14183 400 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 SETDB1Q15047 1291 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 RBBP5Q15291 538 aaKnown RBP14.56□□□□□ -0.08
VAPA-201ENST00000340541 ADNP2Q6IQ32 1131 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 TMIGD1Q6UXZ0 262 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 TAOK1Q7L7X3 1001 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 VN1R5Q7Z5H4 357 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.56□□□□□ -0.083e-9■■■■■ 57.3
VAPA-201ENST00000340541 SNX31Q8N9S9 440 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 TRPV3Q8NET8 790 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 FDCSPQ8NFU4 85 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 OR11G2Q8NGC1 345 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 UTP15Q8TED0 518 aaKnown RBP14.56□□□□□ -0.08
VAPA-201ENST00000340541 SMIM10Q96HG1 83 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 FER1L6-AS2Q96M78 137 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 NUDT9Q9BW91 350 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 ANKHQ9HCJ1 492 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 C5AR2Q9P296 337 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 FBXL4Q9UKA2 621 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 ZNF490Q9ULM2 529 aaPredicted RBP14.56□□□□□ -0.08
VAPA-201ENST00000340541 NAALAD2Q9Y3Q0 740 aa14.56□□□□□ -0.08
VAPA-201ENST00000340541 A0A1W2PQ72 361 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 ZNF860A6NHJ4 632 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 SYCE1LA8MT33 242 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 CLGNO14967 610 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 ALOX12BO75342 701 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 RDH16O75452 317 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 JRKO75564 520 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 WFS1O76024 890 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 SERPIND1P05546 499 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 SERPINA6P08185 405 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 SNRPAP09012 282 aaKnown RBP14.55□□□□□ -0.08
VAPA-201ENST00000340541 ZNF888P0CJ79 500 aaPredicted RBP14.55□□□□□ -0.08
VAPA-201ENST00000340541 ALOX12P18054 663 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 CXCR2P25025 360 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 CASP2P42575 452 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 SOX8P57073 446 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 RGS1Q08116 209 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 NAA30Q147X3 362 aaPredicted RBP14.55□□□□□ -0.08
VAPA-201ENST00000340541 HERC3Q15034 1050 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 TBCCQ15814 346 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 RBBP7Q16576 425 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 XKR6Q5GH73 641 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 TIFABQ6ZNK6 161 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 OR5T3Q8NGG3 340 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 OR51Q1Q8NH59 317 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 PTCD3Q96EY7 689 aaKnown RBP14.55□□□□□ -0.08
VAPA-201ENST00000340541 SMAD5Q99717 465 aaKnown RBP14.55□□□□□ -0.08
VAPA-201ENST00000340541 YIPF2Q9BWQ6 316 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 PITHD1Q9GZP4 211 aaPredicted RBP14.55□□□□□ -0.08
VAPA-201ENST00000340541 KLHL31Q9H511 634 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 HCN3Q9P1Z3 774 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 FETUBQ9UGM5 382 aa14.55□□□□□ -0.08
VAPA-201ENST00000340541 LRRC14BA6NHZ5 514 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 A6NL46 340 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 K7EPI3 171 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 H2AFYO75367 372 aaKnown RBP14.54□□□□□ -0.08
VAPA-201ENST00000340541 SBK3P0C264 359 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 COL6A2P12110 1019 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 GNLYP22749 145 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 XCR1P46094 333 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 EMP2P54851 167 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 ALDH18A1P54886 795 aaKnown RBP14.54□□□□□ -0.08
VAPA-201ENST00000340541 CHIT1Q13231 466 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 PCBP2Q15366 365 aaKnown RBP eCLIP14.54□□□□□ -0.08
VAPA-201ENST00000340541 PFKFB4Q16877 469 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 NADK2Q4G0N4 442 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 DEFB134Q4QY38 66 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 C4orf17Q53FE4 359 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 JMJD6Q6NYC1 403 aaPredicted RBP14.54□□□□□ -0.08
VAPA-201ENST00000340541 KLC3Q6P597 504 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 TMEM151AQ8N4L1 468 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 MZB1Q8WU39 189 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 C8orf44Q96CB5 159 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 SEC16BQ96JE7 1060 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 EFCAB11Q9BUY7 163 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms