RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 MEF2AQ02078 507 aaPredicted RBP12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 IGFBP7Q16270 282 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 SYT16Q17RD7 645 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 MINDY4Q4G0A6 757 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 B3GNTL1Q67FW5 361 aaPredicted RBP12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 ISLR2Q6UXK2 745 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 TMIGD1Q6UXZ0 262 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 PRSS41Q7RTY9 318 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 PDSS2Q86YH6 399 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 Q8NA96 180 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 C8orf44Q96CB5 159 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 MACROD1Q9BQ69 325 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 FUT8Q9BYC5 575 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 SLC6A16Q9GZN6 736 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 VN1R1Q9GZP7 353 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 NT5DC2Q9H857 520 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 DNAJC11Q9NVH1 559 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 NUDT4Q9NZJ9 180 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 PRDM4Q9UKN5 801 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 RNF112Q9ULX5 631 aa12.6□□□□□ -0.39
SIRPB3P-201ENST00000340424 A0A088AWK7 358 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 NCF1BA6NI72 391 aaPredicted RBP12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 SYCE1LA8MT33 242 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 NCF1CA8MVU1 366 aaPredicted RBP12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 FFAR3O14843 346 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 CLGNO14967 610 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 GPR42O15529 346 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 KERAO60938 352 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 STK16O75716 305 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 SERPIND1P05546 499 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 LTA4HP09960 611 aaKnown RBP12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 NCF1P14598 390 aaPredicted RBP12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 ZNF10P21506 573 aaPredicted RBP12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 EEF1A2Q05639 463 aaKnown RBP12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 Q0VFX4 171 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 MFAP5Q13361 173 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 LAPTM5Q13571 262 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 PCOLCEQ15113 449 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 RBBP5Q15291 538 aaKnown RBP12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 OR4D1Q15615 310 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 INPP5JQ15735 1006 aaPredicted RBP12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 PDK4Q16654 411 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 FAM83EQ2M2I3 478 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 COLEC12Q5KU26 742 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 MFSD4BQ5TF39 518 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 SLCO4C1Q6ZQN7 724 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 LRRC70Q7Z2Q7 622 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 CPEB2Q7Z5Q1 589 aaKnown RBP12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 ANKRD53Q8N9V6 530 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 RHEBL1Q8TAI7 183 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 TBC1D20Q96BZ9 403 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 PTCD3Q96EY7 689 aaKnown RBP12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 FMO2Q99518 471 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 TMEM79Q9BSE2 394 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 EFCAB11Q9BUY7 163 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 ACSS3Q9H6R3 686 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 CD274Q9NZQ7 290 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 HCN3Q9P1Z3 774 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 PTBP2Q9UKA9 531 aaKnown RBP12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 ACOT9Q9Y305 439 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 FLNCQ14315 2725 aa12.59□□□□□ -0.39
SIRPB3P-201ENST00000340424 MAGEB17A8MXT2 336 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 MASP2O00187 686 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 CLEC3AO75596 197 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 FAM155BO75949 473 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 WFS1O76024 890 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 FHP07954 510 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 TFEBP19484 476 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 SOX11P35716 441 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 GDF5P43026 501 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 TLR1Q15399 786 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 TBCCQ15814 346 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 EXT1Q16394 746 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 PLEKHN1Q494U1 663 aaPredicted RBP12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 DEFB134Q4QY38 66 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 PAGE2BQ5JRK9 111 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 PLAG1Q6DJT9 500 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 FAAH2Q6GMR7 532 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 TAOK1Q7L7X3 1001 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 CMC1Q7Z7K0 106 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 ISCA2Q86U28 154 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 SPATA6LQ8N4H0 392 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 CEP112Q8N8E3 955 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 PLPP5Q8NEB5 264 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 UTP15Q8TED0 518 aaKnown RBP12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 CREB3L4Q8TEY5 395 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 UBTD2Q8WUN7 234 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 GAL3ST3Q96A11 431 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 MOCOSQ96EN8 888 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 WDR34Q96EX3 536 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 SPNS1Q9H2V7 528 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 NINJ2Q9NZG7 142 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 TEKT2Q9UIF3 430 aa12.58□□□□□ -0.4
SIRPB3P-201ENST00000340424 DOCK10Q96BY6 2186 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 NBASA2RRP1 2371 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 DYTNA2CJ06 578 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 SYNDIG1LA6NDD5 238 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 PSMD12O00232 456 aaPredicted RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 TAPBPO15533 448 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 JRKO75564 520 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms