RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 KCT2Q8NC54 265 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 SRFBP1Q8NEF9 429 aaKnown RBP17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 OR2L5Q8NG80 312 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 OR2T11Q8NH01 316 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 WDR36Q8NI36 951 aaKnown RBP17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 GAL3ST3Q96A11 431 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 MS4A6EQ96DS6 147 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 METTL2AQ96IZ6 378 aaKnown RBP17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 MAELQ96JY0 434 aaKnown RBP17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 F2RL3Q96RI0 385 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 MACROD1Q9BQ69 325 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 REXO4Q9GZR2 422 aaKnown RBP17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 NPHS2Q9NP85 383 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 SLC22A7Q9Y694 548 aa17.03■□□□□ 0.32
SDCBP2-201ENST00000339987 CNOT1A5YKK6 2376 aaKnown RBP17.02■□□□□ 0.32
SDCBP2-201ENST00000339987 HYAL3O43820 417 aaPredicted RBP17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 SMIM10L1P0DMW3 83 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 AQP5P55064 265 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 TGM3Q08188 693 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 TARDBPQ13148 414 aaKnown RBP eCLIP17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 PUM1Q14671 1186 aaKnown RBP eCLIP17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 NR6A1Q15406 480 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 NDUFA9Q16795 377 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 UTP15Q8TED0 518 aaKnown RBP17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 RGMAQ96B86 450 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 SMIM10Q96HG1 83 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 PPP3R2Q96LZ3 170 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 KLHL31Q9H511 634 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 STARD5Q9NSY2 213 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 IRAK4Q9NWZ3 460 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 AHSPQ9NZD4 102 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 KLHL14Q9P2G3 628 aa17.02■□□□□ 0.31
SDCBP2-201ENST00000339987 HYKKA2RU49 373 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 PLD2O14939 933 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 LSM1O15116 133 aaKnown RBP17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 PRR35P0CG20 571 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 RAB15P59190 212 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 TBL3Q12788 808 aaKnown RBP17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 SMU1Q2TAY7 513 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 FAM214AQ32MH5 1076 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 VWA5B1Q5TIE3 1220 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 TRIM40Q6P9F5 258 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 ABHD17CQ6PCB6 329 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 ABHD13Q7L211 337 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 UBE3DQ7Z6J8 389 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 CPLX4Q7Z7G2 160 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 PPP1R3BQ86XI6 285 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 METTL4Q8N3J2 472 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 RFWD2Q8NHY2 731 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 ACTRT2Q8TDY3 377 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 TUBGCP3Q96CW5 907 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 C10orf90Q96M02 699 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 KCNC2Q96PR1 638 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 LRTM1Q9HBL6 345 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 C1orf109Q9NX04 203 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 SIRT5Q9NXA8 310 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 SLC39A1Q9NY26 324 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 SRPK3Q9UPE1 567 aa17.01■□□□□ 0.31
SDCBP2-201ENST00000339987 ATP6AP2A0A1C7CYW4 349 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 AGRPO00253 132 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 PLPP1O14494 284 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 POLR1CO15160 346 aaPredicted RBP17■□□□□ 0.31
SDCBP2-201ENST00000339987 ERI3O43414 337 aaKnown RBP17■□□□□ 0.31
SDCBP2-201ENST00000339987 DIAPH2O60879 1101 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 SH3BGRLO75368 114 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 ATP6AP2O75787 350 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 ALOX12P18054 663 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 TSFMP43897 325 aaKnown RBP17■□□□□ 0.31
SDCBP2-201ENST00000339987 IDH3AP50213 366 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 RAP1GDS1P52306 607 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 ARSFP54793 590 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 GABPB1Q06547 395 aaPredicted RBP17■□□□□ 0.31
SDCBP2-201ENST00000339987 FAM53BQ14153 422 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 HERC3Q15034 1050 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 MUM1Q2TAK8 710 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 SLC9B1Q4ZJI4 515 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 SPIN4Q56A73 249 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 SPDYAQ5MJ70 313 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 NIPAL1Q6NVV3 410 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 DGLUCYQ7Z3D6 616 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 ZFAND4Q86XD8 727 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 CHTF18Q8WVB6 975 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 C11orf24Q96F05 449 aaPredicted RBP17■□□□□ 0.31
SDCBP2-201ENST00000339987 THOC1Q96FV9 657 aaKnown RBP17■□□□□ 0.31
SDCBP2-201ENST00000339987 PPP1R36Q96LQ0 422 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 ZPBPQ9BS86 351 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 TBCDQ9BTW9 1192 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 DDA1Q9BW61 102 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 MRPL1Q9BYD6 325 aaKnown RBP17■□□□□ 0.31
SDCBP2-201ENST00000339987 ROGDIQ9GZN7 287 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 WDR55Q9H6Y2 383 aaPredicted RBP17■□□□□ 0.31
SDCBP2-201ENST00000339987 KCNK13Q9HB14 408 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 APMAPQ9HDC9 416 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 DCTN4Q9UJW0 460 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 MRPS2Q9Y399 296 aaKnown RBP17■□□□□ 0.31
SDCBP2-201ENST00000339987 PCDHB3Q9Y5E6 796 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 KIF26BQ2KJY2 2108 aa17■□□□□ 0.31
SDCBP2-201ENST00000339987 PTPRBP23467 1997 aa16.99■□□□□ 0.31
SDCBP2-201ENST00000339987 A0A1W2PNU3 283 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms