RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 NHSL2Q5HYW2 709 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 ANGPTL8Q6UXH0 198 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 Q7L0L9 218 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 VTCN1Q7Z7D3 282 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 TMEM179BQ7Z7N9 219 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SLC9B2Q86UD5 537 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 PROSER1Q86XN7 944 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 METTL4Q8N3J2 472 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 ANKFN1Q8N957 763 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 ABHD11Q8NFV4 315 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SMPDL3AQ92484 453 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 FAM162AQ96A26 154 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 CENPNQ96H22 339 aaPredicted RBP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF597Q96LX8 424 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 TRAPPC9Q96Q05 1148 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 BTBD9Q96Q07 612 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 TPSD1Q9BZJ3 242 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 EHD1Q9H4M9 534 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 GORASP2Q9H8Y8 452 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 PREBQ9HCU5 417 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SLAMF7Q9NQ25 335 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 RAPGEFL1Q9UHV5 662 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 CA14Q9ULX7 337 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 NCKAP1Q9Y2A7 1128 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 C1orf226A1L170 272 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 MAGEA13PA6NCF6 341 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 DENRO43583 198 aaKnown RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 TMPRSS11DO60235 418 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 PGM3O95394 542 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 IGHV4-34P06331 123 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 GPIP06744 558 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 SLC19A1P41440 591 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 ACTR1BP42025 376 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 RAB28P51157 221 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 CCR8P51685 355 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 POLE2P56282 527 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 ACTR1AP61163 376 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 SPIDRQ14159 915 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 CYP27C1Q4G0S4 372 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 AASDHQ4L235 1098 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 LRRC23Q53EV4 343 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 PRPF38BQ5VTL8 546 aaKnown RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 KIAA1614Q5VZ46 1190 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 FAM71E1Q6IPT2 247 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 PPP4R4Q6NUP7 873 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 Q6ZSR6 202 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 LSRQ86X29 649 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF761Q86XN6 746 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 TMEM126BQ8IUX1 230 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 PAPD5Q8NDF8 572 aaKnown RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 OR13H1Q8NG92 308 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 MAGEE2Q8TD90 523 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 NELL1Q92832 810 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 COQ8BQ96D53 544 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 TOE1Q96GM8 510 aaKnown RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 SCARF2Q96GP6 870 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 TIMM29Q9BSF4 260 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 HAUS8Q9BT25 410 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 TRIM15Q9C019 465 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 TRIM4Q9C037 500 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 REEP4Q9H6H4 257 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 SLC6A20Q9NP91 592 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 DCAF13Q9NV06 445 aaKnown RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 TAAR2Q9P1P5 351 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 THEGQ9P2T0 379 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 MAGEL2Q9UJ55 1249 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 FZD4Q9ULV1 537 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 MMP17Q9ULZ9 603 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 CABIN1Q9Y6J0 2220 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 A0A1W2PS29 197 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 NME6O75414 186 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 SNAP29O95721 258 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 LINGO3P0C6S8 592 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 ETFAP13804 333 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF23P17027 643 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 PTX3P26022 381 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 BSGP35613 385 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 BCL6P41182 706 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 PIK3CBP42338 1070 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 ALDH9A1P49189 494 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 MVDP53602 400 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 ARHGAP19Q14CB8 494 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 ALG11Q2TAA5 492 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 ZIK1Q3SY52 487 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 CCNYL2Q5T2Q4 361 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 DEPDC1Q5TB30 811 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 KHDRBS2Q5VWX1 349 aaKnown RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 PRR23BQ6ZRT6 265 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 USP30Q70CQ3 517 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 GPR155Q7Z3F1 870 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 TRIM73Q86UV7 250 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 NRROSQ86YC3 692 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 OR4A15Q8NGL6 344 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 REPS1Q96D71 796 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 FBXL20Q96IG2 436 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 MAGEB10Q96LZ2 347 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 TEFMQ96QE5 360 aaKnown RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 OR2M4Q96R27 311 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 NR1H4Q96RI1 486 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 BARD1Q99728 777 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms