RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 ARF3P61204 181 aaPredicted RBP13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 E2F1Q01094 437 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 TCTE1Q5JU00 501 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 STPG1Q5TH74 334 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 IL23RQ5VWK5 629 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 NOXRED1Q6NXP6 359 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 COMMD6Q7Z4G1 85 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 MIER2Q8N344 545 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 D2HGDHQ8N465 521 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 FITM2Q8N6M3 262 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 CSNK1A1LQ8N752 337 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 N4BP2L2Q92802 583 aaPredicted RBP13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 MS4A6EQ96DS6 147 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 APIPQ96GX9 242 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 ZNF285Q96NJ3 590 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 FCRL4Q96PJ5 515 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 C1orf50Q9BV19 199 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 SYNDIG1Q9H7V2 258 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 ENAMQ9NRM1 1142 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 TMEM9Q9P0T7 183 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 POLR3HQ9Y535 204 aaPredicted RBP13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 COPG1Q9Y678 874 aaKnown RBP13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 CAPN7Q9Y6W3 813 aa13.86□□□□□ -0.19
NIPAL3-202ENST00000339255 A0A088AWK7 358 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 IGHV5-10-1A0A0J9YXX1 117 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 PLPP1O14494 284 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 PRAMEF10O60809 474 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 CDK4P11802 303 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 ZNF10P21506 573 aaPredicted RBP13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 TIA1P31483 386 aaKnown RBP eCLIP13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 GSTM5P46439 218 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 ASMTP46597 345 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 DIO3P55073 304 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 HYAL2Q12891 473 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 SNAP47Q5SQN1 464 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 FRMPD2BQ6IN97 320 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 ABHD13Q7L211 337 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 ARHGAP22Q7Z5H3 698 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 PIP4P1Q86T03 277 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 NUDT13Q86X67 352 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 F2RL3Q96RI0 385 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 TBCDQ9BTW9 1192 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 ROGDIQ9GZN7 287 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 FANCEQ9HB96 536 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 ATXN7L1Q9ULK2 861 aaPredicted RBP13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 MAPRE3Q9UPY8 281 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 PCDHGA1Q9Y5H4 931 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 GPR45Q9Y5Y3 372 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 LOC105369274A0A096LPK9 316 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 LOC102723532A0A0G2JNH3 316 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 GNG14A0A1W2PPG7 69 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 CCT8L1PA6NM43 557 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 ERI3O43414 337 aaKnown RBP13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 BCKDHAP12694 445 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 GABRA4P48169 554 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 EMP3P54852 163 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 VSX2P58304 361 aaPredicted RBP13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 SKP1P63208 163 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 ZNF763Q0D2J5 394 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 PDCD4Q53EL6 469 aaKnown RBP13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 TOR1AIP1Q5JTV8 583 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 NIPAL1Q6NVV3 410 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 CYB5D1Q6P9G0 228 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 CYP20A1Q6UW02 462 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 C6orf89Q6UWU4 347 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 ZNF574Q6ZN55 896 aaPredicted RBP13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 GLRX5Q86SX6 157 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 SLITRK4Q8IW52 837 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 OR4N4Q8N0Y3 316 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 STARD8Q92502 1023 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 C17orf62Q9BQA9 187 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 DDX31Q9H8H2 851 aaKnown RBP13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 SYNPO2LQ9H987 977 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 ZIM2Q9NZV7 527 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 MCM8Q9UJA3 840 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 WBP11Q9Y2W2 641 aaKnown RBP13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 SLC22A7Q9Y694 548 aa13.85□□□□□ -0.19
NIPAL3-202ENST00000339255 COL27A1Q8IZC6 1860 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 ARHGAP10A1A4S6 786 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 PSMD12O00232 456 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 PCDH7O60245 1069 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 PRMT3O60678 531 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 SH3BGRLO75368 114 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 RFPL3O75679 317 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 SCELO95171 688 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 EIF2S1P05198 315 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 ANXA4P09525 319 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 G6PDP11413 515 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 JAK1P23458 1154 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 SSR2P43308 183 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 SEPHS1P49903 392 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 UBAP2LQ14157 1087 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 HERC3Q15034 1050 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 MAPRE2Q15555 327 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 GARNL3Q5VVW2 1013 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 IKBIPQ70UQ0 350 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 TMPRSS9Q7Z410 1059 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 LIX1Q8N485 282 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 MARK4Q96L34 752 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 CCDC74BQ96LY2 380 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms