RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 AHRP35869 848 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 CD96P40200 585 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 HNF4AP41235 474 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 EFNA3P52797 238 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 ARL4CP56559 192 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 ALDH6A1Q02252 535 aaKnown RBP10.03□□□□□ -0.8
CAPN3-202ENST00000337571 ART3Q13508 389 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 TUBA3CQ13748 450 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 RBBP5Q15291 538 aaKnown RBP10.03□□□□□ -0.8
CAPN3-202ENST00000337571 OR1C1Q15619 314 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 KRTCAP3Q53RY4 240 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 CATSPEREQ5SY80 951 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 TUBA3EQ6PEY2 450 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 STRA8Q7Z7C7 330 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 CRLF3Q8IUI8 442 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 NKAPQ8N5F7 415 aaKnown RBP10.03□□□□□ -0.8
CAPN3-202ENST00000337571 TMEM178AQ8NBL3 297 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 ZNF740Q8NDX6 193 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 ARMC2Q8NEN0 867 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 TRPV3Q8NET8 790 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 OR56A3Q8NH54 315 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 SLCO2A1Q92959 643 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 FBXL8Q96CD0 374 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 PDLIM5Q96HC4 596 aaKnown RBP10.03□□□□□ -0.8
CAPN3-202ENST00000337571 PTCHD1Q96NR3 888 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 EGFL8Q99944 293 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 AIF1LQ9BQI0 150 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 SARGQ9BW04 601 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 RBCK1Q9BYM8 510 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 CDCP1Q9H5V8 836 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 CLK4Q9HAZ1 481 aaKnown RBP10.03□□□□□ -0.8
CAPN3-202ENST00000337571 KLHL1Q9NR64 748 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 TRMT1Q9NXH9 659 aaKnown RBP10.03□□□□□ -0.8
CAPN3-202ENST00000337571 ANKRD10Q9NXR5 420 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 ZFATQ9P243 1243 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 ZFP69BQ9UJL9 534 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 CHMP2BQ9UQN3 213 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 KCNE2Q9Y6J6 123 aa10.03□□□□□ -0.8
CAPN3-202ENST00000337571 DOPEY1Q5JWR5 2465 aa10.02□□□□□ -0.8
CAPN3-202ENST00000337571 CROCCQ5TZA2 2017 aa10.02□□□□□ -0.8
CAPN3-202ENST00000337571 SVILO95425 2214 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 CDK2AP1O14519 115 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 ZNF888P0CJ79 500 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-202ENST00000337571 SLC12A2P55011 1212 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 SNRPNP63162 240 aaKnown RBP10.02□□□□□ -0.81
CAPN3-202ENST00000337571 OLR1P78380 273 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 PMP22Q01453 160 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 DR1Q01658 176 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 RHAGQ02094 409 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 SRSF11Q05519 484 aaKnown RBP10.02□□□□□ -0.81
CAPN3-202ENST00000337571 USP10Q14694 798 aaKnown RBP10.02□□□□□ -0.81
CAPN3-202ENST00000337571 MAPKAPK3Q16644 382 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 SPINK14Q6IE38 97 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 BLOC1S3Q6QNY0 202 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 RPTNQ6XPR3 784 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 FRA10AC1Q70Z53 315 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 MRGPRGQ86SM5 289 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 THOC6Q86W42 341 aaKnown RBP10.02□□□□□ -0.81
CAPN3-202ENST00000337571 RPS19BP1Q86WX3 136 aaKnown RBP10.02□□□□□ -0.81
CAPN3-202ENST00000337571 IGDCC3Q8IVU1 814 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 KLHL7Q8IXQ5 586 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 SRRM1Q8IYB3 904 aaKnown RBP10.02□□□□□ -0.81
CAPN3-202ENST00000337571 AFAP1L2Q8N4X5 818 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 AMER2Q8N7J2 671 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 OR5T3Q8NGG3 340 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 NT5CQ8TCD5 201 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 ANKRD7Q92527 254 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 NEIL2Q969S2 332 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 MOCOSQ96EN8 888 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 VPS39Q96JC1 886 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 MAGED4Q96JG8 741 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 FAR2Q96K12 515 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 CAPZA3Q96KX2 299 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 TSNARE1Q96NA8 513 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 SIGLEC12Q96PQ1 595 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 OR4K3Q96R72 315 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 LANCL2Q9NS86 450 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 LRFN1Q9P244 771 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 SH3BGRL2Q9UJC5 107 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 SLC22A14Q9Y267 594 aa10.02□□□□□ -0.81
CAPN3-202ENST00000337571 DIDO1Q9BTC0 2240 aaKnown RBP10.01□□□□□ -0.81
CAPN3-202ENST00000337571 GABRR3A8MPY1 467 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 SLC19A2O60779 497 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 TSPAN12O95859 305 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 SP1P08047 785 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 RNH1P13489 461 aaKnown RBP10.01□□□□□ -0.81
CAPN3-202ENST00000337571 GNAZP19086 355 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 PAFAH1B1P43034 410 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 CA7P43166 264 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 SCTRP47872 440 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 CYB561P49447 251 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 HNMTP50135 292 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 SMSP52788 366 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 SLC26A5P58743 744 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 RAB8AP61006 207 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 MGAT5Q09328 741 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 ILF2Q12905 390 aaKnown RBP10.01□□□□□ -0.81
CAPN3-202ENST00000337571 SLC25A25Q6KCM7 469 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 TRMT10BQ6PF06 316 aaKnown RBP10.01□□□□□ -0.81
CAPN3-202ENST00000337571 XKRXQ6PP77 449 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms