RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 RASGRP3Q8IV61 690 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PEX5LQ8IYB4 626 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 LRRC56Q8IYG6 542 aaPredicted RBP12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PARP8Q8N3A8 854 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 OR52J3Q8NH60 311 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PATE1Q8WXA2 126 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 RAD51AP1Q96B01 352 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 MUS81Q96NY9 551 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 HDAC8Q9BY41 377 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 SYNPO2LQ9H987 977 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 ANKRA2Q9H9E1 313 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 SPHK1Q9NYA1 384 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 A0A1W2PS29 197 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 MAN1A2O60476 641 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 KLHL18O94889 574 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 PRSS23O95084 383 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 PXNP49023 591 aaPredicted RBP12.06□□□□□ -0.48
LIMK1-201ENST00000336180 DPTQ07507 201 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 ENPP7Q6UWV6 458 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 CARM1Q86X55 608 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 FAM129CQ86XR2 697 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 TMEM145Q8NBT3 493 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 HMGB4Q8WW32 186 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 TFAP2CQ92754 450 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 EXOSC8Q96B26 276 aaKnown RBP12.06□□□□□ -0.48
LIMK1-201ENST00000336180 COX14Q96I36 57 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 C9orf16Q9BUW7 83 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 OSBPL11Q9BXB4 747 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 C2orf42Q9NWW7 574 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 PIAS3Q9Y6X2 628 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 SH3BP5O60239 455 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 RAP2AP10114 183 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 CTHP32929 405 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 HOXD12P35452 270 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 HSPB3Q12988 150 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 CEP68Q76N32 757 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 C17orf64Q86WR6 236 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 ZC3H7AQ8IWR0 971 aaKnown RBP12.06□□□□□ -0.48
LIMK1-201ENST00000336180 TSPAN14Q8NG11 270 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 RPLP0P6Q8NHW5 317 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 CHTF18Q8WVB6 975 aa12.06□□□□□ -0.48
LIMK1-201ENST00000336180 DDX18Q9NVP1 670 aaKnown RBP12.06□□□□□ -0.48
LIMK1-201ENST00000336180 NFKBIL1Q9UBC1 381 aaPredicted RBP12.06□□□□□ -0.48
LIMK1-201ENST00000336180 CXorf51AA0A1B0GTR3 108 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 A0A1W2PQF6 199 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 TMX2-CTNND1H3BSU7 103 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 ERN1O75460 977 aaKnown RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 KCNK5O95279 499 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 TNFAIP8O95379 198 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 TBX6O95947 436 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 ENPP1P22413 925 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 EEF1B2P24534 225 aaKnown RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 LTBRP36941 435 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 GZMMP51124 257 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 ADPRHP54922 357 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 TPD52P55327 224 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 CSTF3Q12996 717 aaKnown RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 SIM2Q14190 667 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 CDKL4Q5MAI5 379 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 ZNF776Q68DI1 518 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 TMEM92Q6UXU6 159 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 PTOV1Q86YD1 416 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 DHRSXQ8N5I4 330 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 OR4E2Q8NGC2 313 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 C16orf78Q8WTQ4 265 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 DTNBP1Q96EV8 351 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 RMND5BQ96G75 393 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 C17orf62Q9BQA9 187 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 SGPP1Q9BX95 441 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 ADNPQ9H2P0 1102 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 KLHL31Q9H511 634 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 NINQ8N4C6 2090 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 G3V2T6 193 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 SNRNP200O75643 2136 aaKnown RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 RASAL1O95294 804 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 CEACAM5P06731 702 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 C8orf89P0DMQ9 161 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 MRPL19P49406 292 aaKnown RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 VLDLRP98155 873 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 HIST2H2ACQ16777 129 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 CYBRD1Q53TN4 286 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 CCNYL2Q5T2Q4 361 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 HIST2H2AA3Q6FI13 130 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 TNFAIP8L2Q6P589 184 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 Q6ZS52 159 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 ZBTB8BQ8NAP8 495 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 TP53I13Q8NBR0 393 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 RLN3Q8WXF3 142 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 RAB8BQ92930 207 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 SIPA1Q96FS4 1042 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 DUS3LQ96G46 650 aaKnown RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 YIPF4Q9BSR8 244 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 BDH2Q9BUT1 245 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 S1PR5Q9H228 398 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 TOR3AQ9H497 397 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 MIEF1Q9NQG6 463 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 DZANK1Q9NVP4 752 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 SMPD3Q9NY59 655 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 ANKDD1BA6NHY2 528 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms