RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 JMJD7P0C870 316 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 TROVE2P10155 538 aaKnown RBP eCLIP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 ALOX15P16050 662 aaPredicted RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 AQP5P55064 265 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 PUM1Q14671 1186 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■□□□□ 8.9
TUBA1B-202ENST00000336023 TMEM35AQ53FP2 167 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 TOR1AIP1Q5JTV8 583 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 SPDYAQ5MJ70 313 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 PRAMEF17Q5VTA0 474 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 CGB2Q6NT52 195 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 TMEM214Q6NUQ4 689 aaKnown RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 TLDC1Q6P9B6 456 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 CYB5D1Q6P9G0 228 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 TMPRSS7Q7RTY8 843 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 BPHLQ86WA6 291 aaPredicted RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 PPP1R3BQ86XI6 285 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 WDR36Q8NI36 951 aaKnown RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 MS4A6EQ96DS6 147 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 CTRCQ99895 268 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 CENPKQ9BS16 269 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 FAM107BQ9H098 131 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 SLC39A1Q9NY26 324 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 DCTN4Q9UJW0 460 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 HYKKA2RU49 373 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 URADA6NGE7 173 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 SDHDO14521 159 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 ZNF749O43361 778 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 ERI3O43414 337 aaKnown RBP13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 DIAPH2O60879 1101 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 RSL1D1O76021 490 aaKnown RBP13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 SEMA3DO95025 777 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 FGF5P12034 268 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 DRD4P21917 467 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 ETV5P41161 510 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 PLA2G16P53816 162 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 RAB8AP61006 207 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 SNRPNP63162 240 aaKnown RBP13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 SF3A3Q12874 501 aaKnown RBP eCLIP13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 NR6A1Q15406 480 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 SLC9B1Q4ZJI4 515 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 GARNL3Q5VVW2 1013 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 PWWP2BQ6NUJ5 590 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 FOXR1Q6PIV2 292 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 EPGNQ6UW88 154 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 ARHGEF39Q8N4T4 335 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 TTC29Q8NA56 475 aaPredicted RBP13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 OR2L5Q8NG80 312 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 RFWD2Q8NHY2 731 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 ZCCHC10Q8TBK6 192 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 UTP15Q8TED0 518 aaKnown RBP13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 RGMAQ96B86 450 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 TUBGCP3Q96CW5 907 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 MRPL1Q9BYD6 325 aaKnown RBP13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 EPN3Q9H201 632 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 WDR55Q9H6Y2 383 aaPredicted RBP13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 RIC8BQ9NVN3 520 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 PISDQ9UG56 409 aa13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 MRPS2Q9Y399 296 aaKnown RBP13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 MDC1Q14676 2089 aaKnown RBP13.05□□□□□ -0.32
TUBA1B-202ENST00000336023 C4orf51C9J302 202 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 LSM1O15116 133 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 MED26O95402 600 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 TIAF1O95411 115 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 ZNF888P0CJ79 500 aaPredicted RBP13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 SMIM10L1P0DMW3 83 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 EPHA3P29320 983 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 IDH3AP50213 366 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 RAP1GDS1P52306 607 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 MAPK10P53779 464 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 EMP3P54852 163 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 RAB15P59190 212 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 TGM3Q08188 693 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 TBL3Q12788 808 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 NDUFA9Q16795 377 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 MUM1Q2TAK8 710 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 FAM214AQ32MH5 1076 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 C3orf38Q5JPI3 329 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 TRIM40Q6P9F5 258 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 ABHD17CQ6PCB6 329 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 ABHD13Q7L211 337 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 UBE3DQ7Z6J8 389 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 CPLX4Q7Z7G2 160 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 TMEM126BQ8IUX1 230 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 SRFBP1Q8NEF9 429 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 PMEPA1Q969W9 287 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 GAL3ST3Q96A11 431 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 APIPQ96GX9 242 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 SMIM10Q96HG1 83 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 C10orf90Q96M02 699 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 KCNC2Q96PR1 638 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 C17orf62Q9BQA9 187 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 SIKE1Q9BRV8 207 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 NDC1Q9BTX1 674 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 NSRP1Q9H0G5 558 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 RABEP2Q9H5N1 569 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 AKTIPQ9H8T0 292 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 KCNK13Q9HB14 408 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 LRTM1Q9HBL6 345 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 CUTCQ9NTM9 273 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 C1orf109Q9NX04 203 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms