RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 HYKKA2RU49 373 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 FOXS1O43638 330 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 LINC00032P0C843 101 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 KITP10721 976 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 HSD3B1P14060 373 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 HSD3B2P26439 372 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 RAB15P59190 212 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 HMGCS1Q01581 520 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 BTKQ06187 659 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 RGS1Q08116 209 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 CUL3Q13618 768 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 GRM7Q14831 915 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 XKR7Q5GH72 579 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 GARNL3Q5VVW2 1013 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 FOXR1Q6PIV2 292 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 CEACAM20Q6UY09 585 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 PRSS41Q7RTY9 318 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 CRLF3Q8IUI8 442 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 WDR75Q8IWA0 830 aaKnown RBP16.64■□□□□ 0.25
CHGA-202ENST00000334654 GBP7Q8N8V2 638 aaPredicted RBP16.64■□□□□ 0.25
CHGA-202ENST00000334654 RNF31Q96EP0 1072 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 DDA1Q9BW61 102 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 ZNF717Q9BY31 904 aaPredicted RBP16.64■□□□□ 0.25
CHGA-202ENST00000334654 PCDHB3Q9Y5E6 796 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 SLC22A7Q9Y694 548 aa16.64■□□□□ 0.25
CHGA-202ENST00000334654 NPIPB8E9PQR5 432 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 SKAP2O75563 359 aaPredicted RBP16.63■□□□□ 0.25
CHGA-202ENST00000334654 B3GALT4O96024 378 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 ZNF888P0CJ79 500 aaPredicted RBP16.63■□□□□ 0.25
CHGA-202ENST00000334654 SPINK2P20155 84 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 TBL3Q12788 808 aaKnown RBP16.63■□□□□ 0.25
CHGA-202ENST00000334654 DCAF12Q5T6F0 453 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 CGB2Q6NT52 195 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 CYB5D1Q6P9G0 228 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 ABHD17CQ6PCB6 329 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 IGF2-ASQ6U949 168 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 HOMEZQ8IX15 550 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 LRRC34Q8IZ02 419 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 KIRREL3Q8IZU9 778 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 OR2L5Q8NG80 312 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 C11orf24Q96F05 449 aaPredicted RBP16.63■□□□□ 0.25
CHGA-202ENST00000334654 SLC46A1Q96NT5 459 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 SERPINI1Q99574 410 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 REXO4Q9GZR2 422 aaKnown RBP16.63■□□□□ 0.25
CHGA-202ENST00000334654 PRDM7Q9NQW5 492 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 CUTCQ9NTM9 273 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 ADAM21Q9UKJ8 722 aa16.63■□□□□ 0.25
CHGA-202ENST00000334654 SAP18O00422 153 aaKnown RBP16.62■□□□□ 0.25
CHGA-202ENST00000334654 PLPP1O14494 284 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 HDAC3O15379 428 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 SCRG1O75711 98 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 TNFSF15O95150 251 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 CHEK2O96017 543 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 ALOX15P16050 662 aaPredicted RBP16.62■□□□□ 0.25
CHGA-202ENST00000334654 RAB8AP61006 207 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 STXBP1P61764 594 aaKnown RBP16.62■□□□□ 0.25
CHGA-202ENST00000334654 GABREP78334 506 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 PHEXP78562 749 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 FAM53BQ14153 422 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 RTP5Q14D33 572 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 PDCD2Q16342 344 aaPredicted RBP16.62■□□□□ 0.25
CHGA-202ENST00000334654 FAM214AQ32MH5 1076 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 TMEM35AQ53FP2 167 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 ZNF385CQ66K41 422 aaPredicted RBP16.62■□□□□ 0.25
CHGA-202ENST00000334654 RHBDD2Q6NTF9 364 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 CHSY3Q70JA7 882 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 PDSS2Q86YH6 399 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 TMEM126BQ8IUX1 230 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 AMER3Q8N944 861 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 TTC29Q8NA56 475 aaPredicted RBP16.62■□□□□ 0.25
CHGA-202ENST00000334654 ZCCHC10Q8TBK6 192 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 CHTF18Q8WVB6 975 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 GAL3ST3Q96A11 431 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 FAR2Q96K12 515 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 QRFPRQ96P65 431 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 SCNM1Q9BWG6 230 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 MRPL1Q9BYD6 325 aaKnown RBP16.62■□□□□ 0.25
CHGA-202ENST00000334654 NLNQ9BYT8 704 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 NUF2Q9BZD4 464 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 B3GNT4Q9C0J1 378 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 NRSN2Q9GZP1 204 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 FGFR1OP2Q9NVK5 253 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 IRAK4Q9NWZ3 460 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 FOXJ2Q9P0K8 574 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 DHCR7Q9UBM7 475 aaKnown RBP16.62■□□□□ 0.25
CHGA-202ENST00000334654 VPS29Q9UBQ0 182 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 SLC12A4Q9UP95 1085 aa16.62■□□□□ 0.25
CHGA-202ENST00000334654 TMEM184BQ9Y519 407 aaPredicted RBP16.62■□□□□ 0.25
CHGA-202ENST00000334654 A0A0G2JN53 185 aa16.61■□□□□ 0.25
CHGA-202ENST00000334654 CDRT15L2A8MXV6 281 aa16.61■□□□□ 0.25
CHGA-202ENST00000334654 RTCAO00442 366 aaKnown RBP16.61■□□□□ 0.25
CHGA-202ENST00000334654 ERI3O43414 337 aaKnown RBP16.61■□□□□ 0.25
CHGA-202ENST00000334654 DNAJB6O75190 326 aa16.61■□□□□ 0.25
CHGA-202ENST00000334654 NTRK1P04629 796 aa16.61■□□□□ 0.25
CHGA-202ENST00000334654 ALOX12P18054 663 aa16.61■□□□□ 0.25
CHGA-202ENST00000334654 ITGAXP20702 1163 aa16.61■□□□□ 0.25
CHGA-202ENST00000334654 PRPH2P23942 346 aa16.61■□□□□ 0.25
CHGA-202ENST00000334654 LSP1P33241 339 aa16.61■□□□□ 0.25
CHGA-202ENST00000334654 BSGP35613 385 aa16.61■□□□□ 0.25
CHGA-202ENST00000334654 PLA2G16P53816 162 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms