RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 RWDD3Q9Y3V2 267 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 HSPE1-MOB4S4R3N1 261 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 CHD7Q9P2D1 2997 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 A0A0J9YVX5 310 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 VEGFDO43915 354 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 C9P02748 559 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 ETFAP13804 333 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 ZNF182P17025 639 aaPredicted RBP13.97□□□□□ -0.17
TPM3-206ENST00000330188 FMO3P31513 532 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 GALK1P51570 392 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 C2orf80Q0P641 193 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 EIF4HQ15056 248 aaKnown RBP13.97□□□□□ -0.17
TPM3-206ENST00000330188 TEAD4Q15561 434 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 FAM78AQ5JUQ0 283 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 IER5LQ5T953 404 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 FAM71E1Q6IPT2 247 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 FAHD1Q6P587 224 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 ERN2Q76MJ5 926 aaKnown RBP13.97□□□□□ -0.17
TPM3-206ENST00000330188 METTL4Q8N3J2 472 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 TTC29Q8NA56 475 aaPredicted RBP13.97□□□□□ -0.17
TPM3-206ENST00000330188 ZNF740Q8NDX6 193 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 CIDECQ96AQ7 238 aaPredicted RBP13.97□□□□□ -0.17
TPM3-206ENST00000330188 IL17FQ96PD4 163 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 EPYCQ99645 322 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 MYOCQ99972 504 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 DGCR6LQ9BY27 220 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 TMEM245Q9H330 911 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 MYNNQ9NPC7 610 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 KRT84Q9NSB2 600 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 ATAD3AQ9NVI7 634 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 KIF17Q9P2E2 1029 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 AASSQ9UDR5 926 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 KIF26AQ9ULI4 1882 aaPredicted RBP13.97□□□□□ -0.17
TPM3-206ENST00000330188 NDRG4Q9ULP0 352 aaKnown RBP13.97□□□□□ -0.17
TPM3-206ENST00000330188 PADI2Q9Y2J8 665 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 GMPPBQ9Y5P6 360 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 COL4A3Q01955 1670 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 PI15O43692 258 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 GPR37L1O60883 481 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 TNFRSF21O75509 655 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 JUNDP17535 347 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 CRATP43155 626 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 GP2P55259 537 aaKnown RBP13.97□□□□□ -0.17
TPM3-206ENST00000330188 BNIP3Q12983 259 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 FBXO46Q6PJ61 603 aaPredicted RBP13.97□□□□□ -0.17
TPM3-206ENST00000330188 UNC5DQ6UXZ4 953 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 TSEN54Q7Z6J9 526 aaKnown RBP13.97□□□□□ -0.17
TPM3-206ENST00000330188 ATG16L2Q8NAA4 619 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 PLA2G15Q8NCC3 412 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 B4GALNT2Q8NHY0 566 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 SETD7Q8WTS6 366 aaKnown RBP13.97□□□□□ -0.17
TPM3-206ENST00000330188 PPCDCQ96CD2 204 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 SLC35A5Q9BS91 424 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 DOHHQ9BU89 302 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 FUNDC2Q9BWH2 189 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 PRKAB1Q9Y478 270 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 PCDHGB1Q9Y5G3 927 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 C2orf16Q68DN1 1984 aa13.97□□□□□ -0.17
TPM3-206ENST00000330188 E9PQ18 207 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 DNAJB5O75953 348 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 INMTO95050 263 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 KLK1P06870 262 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 HTR1BP28222 390 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 EPHA2P29317 976 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 RPL3P39023 403 aaKnown RBP13.96□□□□□ -0.17
TPM3-206ENST00000330188 PIK3CBP42338 1070 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 CASP9P55211 416 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 TAS2R50P59544 299 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 PRSS53Q2L4Q9 553 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 PRAMEF14Q5SWL7 426 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 PRAMEF13Q5VWM6 474 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 PSRC1Q6PGN9 363 aaPredicted RBP13.96□□□□□ -0.17
TPM3-206ENST00000330188 ANGPTL8Q6UXH0 198 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 VN1R5Q7Z5H4 357 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 CROCCP3Q8IVE0 287 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 MMAAQ8IVH4 418 aaKnown RBP13.96□□□□□ -0.17
TPM3-206ENST00000330188 ST13P5Q8NFI4 369 aaPredicted RBP13.96□□□□□ -0.17
TPM3-206ENST00000330188 OR52N2Q8NGI0 321 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 OR5AR1Q8NGP9 310 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 CXorf40AQ8TE69 158 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 EZH1Q92800 747 aaPredicted RBP13.96□□□□□ -0.17
TPM3-206ENST00000330188 COX14Q96I36 57 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 CCDC90BQ9GZT6 254 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 DYRK4Q9NR20 520 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 DPP7Q9UHL4 492 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 PSME2Q9UL46 239 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 PLAGL1Q9UM63 463 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 ASF1AQ9Y294 204 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 TMEM98Q9Y2Y6 226 aa13.96□□□□□ -0.17
TPM3-206ENST00000330188 INHBBP09529 407 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 P2RY2P41231 377 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 CXCR4P61073 352 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 SELENOWP63302 87 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 SLC35A2P78381 396 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 EMX1Q04741 257 aaPredicted RBP13.96□□□□□ -0.18
TPM3-206ENST00000330188 FCHO2Q0JRZ9 810 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 KIAA1614Q5VZ46 1190 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 LCTLQ6UWM7 567 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 TMC5Q6UXY8 1006 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 SLC16A12Q6ZSM3 486 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms