RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.78□□□□□ -0.36
GTF3C6-201ENST00000329970 SPNS1Q9H2V7 528 aa12.78□□□□□ -0.36
GTF3C6-201ENST00000329970 STMN3Q9NZ72 180 aa12.78□□□□□ -0.36
GTF3C6-201ENST00000329970 DYRK1BQ9Y463 629 aa12.78□□□□□ -0.36
GTF3C6-201ENST00000329970 CRYBG3Q68DQ2 2970 aa12.78□□□□□ -0.36
GTF3C6-201ENST00000329970 NCOA6Q14686 2063 aaPredicted RBP12.77□□□□□ -0.36
GTF3C6-201ENST00000329970 PCNX1Q96RV3 2341 aa12.77□□□□□ -0.36
GTF3C6-201ENST00000329970 IGHV3-20A0A0C4DH32 117 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 CDC7O00311 574 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 FANCGO15287 622 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 SERPINA6P08185 405 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 SLC6A12P48065 614 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 POU4F1Q01851 419 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 ZNF33BQ06732 778 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 HYAL2Q12891 473 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 USP10Q14694 798 aaKnown RBP12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 ABRAXAS2Q15018 415 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 NSDHLQ15738 373 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 MEP1AQ16819 746 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 SFT2D3Q587I9 215 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 CDKL4Q5MAI5 379 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 ACER2Q5QJU3 275 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 ZBED8Q8IZ13 594 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 TTLQ8NG68 377 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 CREB3L4Q8TEY5 395 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 RELTQ969Z4 430 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 PITHD1Q9GZP4 211 aaPredicted RBP12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 DERL2Q9GZP9 239 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 GPRC5BQ9NZH0 403 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 WHRNQ9P202 907 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 OSGIN2Q9Y236 505 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 SLC22A14Q9Y267 594 aa12.77□□□□□ -0.37
GTF3C6-201ENST00000329970 A1L4Q6 167 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 NPEPPSL1A6NEC2 478 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 LRRTM2O43300 516 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 CHST10O43529 356 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 GSTA2P09210 222 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 ZNF888P0CJ79 500 aaPredicted RBP12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 GNAZP19086 355 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 GGT5P36269 586 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 SLC26A5P58743 744 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.76□□□□□ -0.379e-6■■■■□ 25
GTF3C6-201ENST00000329970 DEFB134Q4QY38 66 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 HIST2H2BCQ6DN03 193 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 MAATS1Q7Z4T9 603 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 TMPRSS11BQ86T26 416 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 CEP97Q8IW35 865 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 SLC34A3Q8N130 599 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 TCAIMQ8N3R3 496 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 SLC5A8Q8N695 610 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 MDS2Q8NDY4 140 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 OR5T3Q8NGG3 340 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 ELP5Q8TE02 316 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 ANKRD49Q8WVL7 239 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 ANP32BQ92688 251 aaKnown RBP12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 CDKL2Q92772 493 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 RHBDF1Q96CC6 855 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 SCMH1Q96GD3 660 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 MAGEB10Q96LZ2 347 aaPredicted RBP12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 TSNARE1Q96NA8 513 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 KRT12Q99456 494 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 ERP44Q9BS26 406 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 CAPS2Q9BXY5 557 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 TRIM31Q9BZY9 425 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 EHD1Q9H4M9 534 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 NT5DC2Q9H857 520 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 KCNK13Q9HB14 408 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 GPAMQ9HCL2 828 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 SMYD2Q9NRG4 433 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 CTNNAL1Q9UBT7 734 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 SNX24Q9Y343 169 aa12.76□□□□□ -0.37
GTF3C6-201ENST00000329970 CELSR2Q9HCU4 2923 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 IGKV3D-11A0A0A0MRZ8 115 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 TCRBV16S1A1N1A0A5B0 115 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 SYNDIG1LA6NDD5 238 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 OR2W5A6NFC9 320 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 ZNF860A6NHJ4 632 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 RNH1P13489 461 aaKnown RBP12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 OR4D2P58180 307 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 TAS2R50P59544 299 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 ACTN3Q08043 901 aaPredicted RBP12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 CALCOCO2Q13137 446 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 TUBA3CQ13748 450 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 ZNF460Q14592 562 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 TGFBIQ15582 683 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 TSNQ15631 228 aaKnown RBP12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 ZRSR2Q15696 482 aaKnown RBP12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 ZNF766Q5HY98 468 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 TUBA3EQ6PEY2 450 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 SLCO4C1Q6ZQN7 724 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 FRA10AC1Q70Z53 315 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 CRLF3Q8IUI8 442 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 BEST3Q8N1M1 668 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 ARMC10Q8N2F6 343 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 PYROXD1Q8WU10 500 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 TSLPQ969D9 159 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 TSPAN17Q96FV3 270 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 GPR22Q99680 433 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 NPAS2Q99743 824 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 CPNE1Q99829 537 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms