RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ADAMTS4O75173 837 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 PRKRAO75569 313 aaKnown RBP11.44□□□□□ -0.58
SHMT2-201ENST00000328923 PTHP01270 115 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 HEXBP07686 556 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 ANXA6P08133 673 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 LHCGRP22888 699 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 PLK1P53350 603 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 CASP6P55212 293 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 ERVK-25P63136 954 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 SOX4Q06945 474 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-201ENST00000328923 EIF3MQ7L2H7 374 aaKnown RBP11.44□□□□□ -0.58
SHMT2-201ENST00000328923 DPH6Q7L8W6 267 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 NLRC3Q7RTR2 1065 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 HIPK1Q86Z02 1210 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 SLC41A1Q8IVJ1 513 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 NKAIN4Q8IVV8 208 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 FAM217AQ8IXS0 508 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 OR2T4Q8NH00 348 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 OR5K1Q8NHB7 308 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 HPDLQ96IR7 371 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 MARVELD1Q9BSK0 173 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 CNPPD1Q9BV87 410 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 ERVK-6Q9BXR3 956 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 ABCB9Q9NP78 766 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 IMPAD1Q9NX62 359 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 MAGEL2Q9UJ55 1249 aa11.44□□□□□ -0.58
SHMT2-201ENST00000328923 UBA6A0AVT1 1052 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-201ENST00000328923 POM121BA6NF01 834 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 MPTX1A8MV57 137 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 H3BM21 787 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 WRBO00258 174 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 SLC43A1O75387 559 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 MATN4O95460 622 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 ADRB1P08588 477 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 H2AFB1P0C5Y9 115 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 H2AFB2P0C5Z0 115 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 HLA-EP13747 358 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 S100PP25815 95 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 PTPN3P26045 913 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 NNMTP40261 264 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 RIDAP52758 137 aaKnown RBP11.43□□□□□ -0.58
SHMT2-201ENST00000328923 HUNKP57058 714 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 DEFA5Q01523 94 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 DSC2Q02487 901 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 LAMTOR4Q0VGL1 99 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 DEFB115Q30KQ5 88 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 ZNF792Q3KQV3 632 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 ZNF648Q5T619 568 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-201ENST00000328923 ARHGAP17Q68EM7 881 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 ENTHD1Q8IYW4 607 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 PGBD5Q8N414 524 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 LRRC17Q8N6Y2 441 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 BVESQ8NE79 360 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 DUSP18Q8NEJ0 188 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 RNF139Q8WU17 664 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 TSPEARQ8WU66 669 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 BTN2A2Q8WVV5 523 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 APH1BQ8WW43 257 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 MTERF3Q96E29 417 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 LRRC46Q96FV0 321 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 WDFY2Q96P53 400 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 OR5M11Q96RB7 305 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 PCYT2Q99447 389 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 FZD8Q9H461 694 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 PRMT8Q9NR22 394 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-201ENST00000328923 SNTG1Q9NSN8 517 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 GPN3Q9UHW5 284 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-201ENST00000328923 SLC35F4A4IF30 521 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 ARGFXA6NJG6 315 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 INMT-MINDY4F8WBC2 141 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 CCNDBP1O95273 360 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 C1RP00736 705 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 IFNA4P05014 189 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 PRF1P14222 555 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 DCDC1P59894 354 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 DMC1Q14565 340 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 LY6KQ17RY6 165 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 FAM83EQ2M2I3 478 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 TECRLQ5HYJ1 363 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 C9orf152Q5JTZ5 239 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 MACC1Q6ZN28 852 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 PDZD4Q76G19 769 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-201ENST00000328923 RAB11FIP2Q7L804 512 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 SLC22A9Q8IVM8 553 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 CCNYQ8ND76 341 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 OR1M1Q8NGA1 313 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 FATE1Q969F0 183 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 ASPNQ9BXN1 380 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 MED28Q9H204 178 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 CDT1Q9H211 546 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 ACTR8Q9H981 624 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 SLCO1C1Q9NYB5 712 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 TNFSF13BQ9Y275 285 aa11.43□□□□□ -0.58
SHMT2-201ENST00000328923 PRAMEF33A0A0G2JMD5 474 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 FAM95CA0A1B0GW59 222 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 M0R233 179 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 UBFD1O14562 309 aaKnown RBP11.42□□□□□ -0.58
SHMT2-201ENST00000328923 SCAMP1O15126 338 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 HCN1O60741 890 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 PRAMEF10O60809 474 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms