RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 KCNA5P22460 613 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 HTR1EP28566 365 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 DNASE1L1P49184 302 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 XKP51811 444 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 FCHO2Q0JRZ9 810 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 PHF19Q5T6S3 580 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 LCTLQ6UWM7 567 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 P2RY8Q86VZ1 359 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 TMEM25Q86YD3 366 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 RAB2BQ8WUD1 216 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 TMEM234Q8WY98 164 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 PRTFDC1Q9NRG1 225 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 APOBEC3BQ9UH17 382 aaKnown RBP11.02□□□□□ -0.65
COL4A5-201ENST00000328300 LOC285095A0A1B0GVY8 99 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 RFPL2O75678 378 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 MYCLP1P12525 358 aaPredicted RBP11.02□□□□□ -0.65
COL4A5-201ENST00000328300 NCK1P16333 377 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 PPP3R1P63098 170 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 POU6F2P78424 691 aaPredicted RBP11.02□□□□□ -0.65
COL4A5-201ENST00000328300 MERTKQ12866 999 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 GRHL2Q6ISB3 625 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 CEACAM20Q6UY09 585 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 GALNT5Q7Z7M9 940 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 KLHL36Q8N4N3 616 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 SCAMP4Q969E2 229 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 C1GALT1C1Q96EU7 318 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 CPNE2Q96FN4 548 aaPredicted RBP11.02□□□□□ -0.65
COL4A5-201ENST00000328300 ASPNQ9BXN1 380 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 KAT8Q9H7Z6 458 aaKnown RBP11.02□□□□□ -0.65
COL4A5-201ENST00000328300 SDHDO14521 159 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 S100A9P06702 114 aaKnown RBP11.02□□□□□ -0.65
COL4A5-201ENST00000328300 LYNP07948 512 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 MCFD2Q8NI22 146 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 UCK2Q9BZX2 261 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 ZBP1Q9H171 429 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 GALNT8Q9NY28 637 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 SH3PXD2BA1X283 911 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 FHP07954 510 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 CD68P34810 354 aaPredicted RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 TBPL1P62380 186 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 CREB5Q02930 508 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 TRAM2Q15035 370 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 MEDAGQ5VYS4 303 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 OR52E4Q8NGH9 312 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 DAZLQ92904 295 aaKnown RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 SGIP1Q9BQI5 828 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 TIMM29Q9BSF4 260 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 MAGIXQ9H6Y5 334 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 RASSF1Q9NS23 344 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 NFKBIL1Q9UBC1 381 aaPredicted RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 SLCO3A1Q9UIG8 710 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 OR1I1O60431 355 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 GP1BBP13224 206 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 EPCAMP16422 314 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 ACADLP28330 430 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 BCAP31P51572 246 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 RAPSNQ13702 412 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 RCAN2Q14206 197 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 TMEM198Q66K66 360 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 ADNP2Q6IQ32 1131 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 OR6C4Q8NGE1 309 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 MED31Q9Y3C7 131 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 KIR2DS5A0A0G2JLQ3 304 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 A0A0G2JNG1 304 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 H0YJX3 145 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 KIR2DS3K7RE56 304 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 RPL10P27635 214 aaKnown RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 CLDN8P56748 225 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 SRP54P61011 504 aaKnown RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 KIR2DS5Q14953 304 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 CTC1Q2NKJ3 1217 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 PYDC2Q56P42 97 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 CRB2Q5IJ48 1285 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 CWF19L1Q69YN2 538 aaKnown RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 KRT77Q7Z794 578 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 MINDY1Q8N5J2 469 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 C3orf58Q8NDZ4 430 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 RNASE11Q8TAA1 199 aaKnown RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 TCHHQ07283 1943 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 SAP18O00422 153 aaKnown RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 NADKO95544 446 aaPredicted RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 PAK4O96013 591 aaPredicted RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 RPLP0P05388 317 aaKnown RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 MNDAP41218 407 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 SLC30A6Q6NXT4 461 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 SLC2A7Q6PXP3 512 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 SYVN1Q86TM6 617 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 TSEN15Q8WW01 171 aaKnown RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 IGLON5A6NGN9 336 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 TLR4O00206 839 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 EDIL3O43854 480 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 TSPAN9O75954 239 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 BCHEP06276 602 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 FGF4P08620 206 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 TAS2R43P59537 309 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 LSM3P62310 102 aaKnown RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 DEFB103AP81534 67 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 RASGEF1BQ0VAM2 473 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 SPANXN4Q5MJ08 99 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 SIX5Q8N196 739 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms