RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 LIN7AO14910 233 aaPredicted RBP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 RPS3P23396 243 aaKnown RBP eCLIP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 MAGEA10P43363 369 aaPredicted RBP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 CCR8P51685 355 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 CLDN8P56748 225 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 INTS11Q5TA45 600 aaKnown RBP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 ZNF776Q68DI1 518 aaPredicted RBP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 FGF14Q92915 247 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 CPEB1Q9BZB8 566 aaKnown RBP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 FAM192AQ9GZU8 254 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 SEMA3GQ9NS98 782 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 STARD5Q9NSY2 213 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 TOR4AQ9NXH8 423 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 DYTNA2CJ06 578 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 RNGTTO60942 597 aaKnown RBP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 MATN4O95460 622 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 CH25HO95992 272 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 PIM1P11309 404 aaPredicted RBP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 NT5EP21589 574 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 MLLT1Q03111 559 aaPredicted RBP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 ZNF763Q0D2J5 394 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 SFSWAPQ12872 951 aaKnown RBP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 ITGADQ13349 1161 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 HEPACAMQ14CZ8 416 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 LSRQ86X29 649 aaPredicted RBP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 ZFP28Q8NHY6 868 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 PYURFQ96I23 114 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 PRSS16Q9NQE7 514 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 SLC23A2Q9UGH3 650 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 MIA3Q5JRA6 1907 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 A8MU76 341 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.07□□□□□ -0.32
SRRM1-201ENST00000323848 FRS3O43559 492 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 SDC3O75056 442 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 TRMUO75648 421 aaKnown RBP13.07□□□□□ -0.32
SRRM1-201ENST00000323848 AGXTP21549 392 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 KDELR2P33947 212 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 BNIP3Q12983 259 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 ATAD3BQ5T9A4 648 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 DGLUCYQ7Z3D6 616 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 HIPK1Q86Z02 1210 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 DCUN1D3Q8IWE4 304 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 HM13Q8TCT9 377 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 CEP295NLQ96MC4 621 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 SLC17A9Q9BYT1 436 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 EPB41L1Q9H4G0 881 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 SAGE1Q9NXZ1 904 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 IL20RAQ9UHF4 553 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 PDPK1O15530 556 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 OR10H2O60403 315 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 ETHE1O95571 254 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 C1QCP02747 245 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 PVRP15151 417 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 MMP12P39900 470 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 CDK6Q00534 326 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 WSCD2Q2TBF2 565 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 OR2T5Q6IEZ7 315 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 HMBOX1Q6NT76 420 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 TBPL2Q6SJ96 375 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 OR2T29Q8NH02 315 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 ZNF514Q96K75 400 aaPredicted RBP13.07□□□□□ -0.32
SRRM1-201ENST00000323848 RBM4BQ9BQ04 359 aaKnown RBP13.07□□□□□ -0.32
SRRM1-201ENST00000323848 RBM4Q9BWF3 364 aaKnown RBP13.07□□□□□ -0.32
SRRM1-201ENST00000323848 SERGEFQ9UGK8 458 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 GREB1Q4ZG55 1949 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 TCRBV21S2A2A0A5A6 115 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 UMPSP11172 480 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 CCNA2P20248 432 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 CDH3P22223 829 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 ATP4BP51164 291 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 SUOXP51687 545 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 SLC14A2Q15849 920 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 CYBRD1Q53TN4 286 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 CASP12Q6UXS9 341 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 EIF3MQ7L2H7 374 aaKnown RBP13.07□□□□□ -0.32
SRRM1-201ENST00000323848 SMPDL3AQ92484 453 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 USP7Q93009 1102 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 ZNF583Q96ND8 569 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 ASB16Q96NS5 453 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 MKRN2Q9H000 416 aaKnown RBP13.07□□□□□ -0.32
SRRM1-201ENST00000323848 EHD1Q9H4M9 534 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 IL21RQ9HBE5 538 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 THUMPD1Q9NXG2 353 aaKnown RBP13.07□□□□□ -0.32
SRRM1-201ENST00000323848 MAT2BQ9NZL9 334 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 NDUFA13Q9P0J0 144 aa13.07□□□□□ -0.32
SRRM1-201ENST00000323848 A8MUA0 341 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 NUAK1O60285 661 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 KRT75O95678 551 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 TIA1P31483 386 aaKnown RBP eCLIP13.06□□□□□ -0.324e-6■■□□□ 13.1
SRRM1-201ENST00000323848 MLLT10P55197 1068 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 PFN3P60673 137 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 ABHD18Q0P651 414 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 VMACQ2NL98 169 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 MINDY4Q4G0A6 757 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 PRRT3Q5FWE3 981 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 SMARCD3Q6STE5 483 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.06□□□□□ -0.32
SRRM1-201ENST00000323848 GPR65Q8IYL9 337 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 OR5D16Q8NGK9 328 aa13.06□□□□□ -0.32
SRRM1-201ENST00000323848 RERGQ96A58 199 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms