RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 FADDQ13158 208 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 SF1Q15637 639 aaKnown RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 EXOC3L2Q2M3D2 409 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CTSL3PQ5NE16 218 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CXorf57Q6NSI4 855 aaKnown RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CDH24Q86UP0 819 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 ADGRG2Q8IZP9 1017 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 UXS1Q8NBZ7 420 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 GFM1Q96RP9 751 aaKnown RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 SLC12A9Q9BXP2 914 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CPNE5Q9HCH3 593 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 TRPV5Q9NQA5 729 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 TAS2R9Q9NYW1 312 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 KIF13BQ9NQT8 1826 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 FAM155AB1AL88 458 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 MRPS14O60783 128 aaKnown RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CDRT1O95170 752 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 HOXD9P28356 352 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 PRR5P85299 388 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 ANGPT1Q15389 498 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 ZNF691Q5VV52 312 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 SPNS2Q8IVW8 549 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 TCEANCQ8N8B7 351 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 C11orf24Q96F05 449 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 TMEM80Q96HE8 168 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 PTPN18Q99952 460 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 ANKRD33BA6NCL7 494 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 EIF3FO00303 357 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 SDC1P18827 310 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 LMAN2Q12907 356 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CLLU1OSQ5K130 101 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CDKL4Q5MAI5 379 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 DPY19L3Q6ZPD9 716 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 FAM20CQ8IXL6 584 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CHPT1Q8WUD6 406 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 TRNT1Q96Q11 434 aaKnown RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 PCBD2Q9H0N5 130 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 ZNF385DQ9H6B1 395 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 GPSM3Q9Y4H4 160 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 I6L893 689 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 STK19P49842 368 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 ADARB1P78563 741 aaKnown RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 GRSF1Q12849 480 aaKnown RBP eCLIP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 UGT3A2Q3SY77 523 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 C11orf88Q6PI97 169 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 TSPAN33Q86UF1 283 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 KREMEN2Q8NCW0 462 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 BPIFB1Q8TDL5 484 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 PHOX2BQ99453 314 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 ACPTQ9BZG2 426 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CLMPQ9H6B4 373 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 FGF19O95750 216 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 GADD45AP24522 165 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 STAT5AP42229 794 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 TMEM53Q6P2H8 277 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 NUDT13Q86X67 352 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 CAMK1GQ96NX5 476 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 PIP5K1AQ99755 562 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 TIGARQ9NQ88 270 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 CALML5Q9NZT1 146 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 P2RX2Q9UBL9 471 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 MGAT4BQ9UQ53 548 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 INSL5Q9Y5Q6 135 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 A0A0G2JN53 185 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 CLCA1A8K7I4 914 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 TMEM189-UBE2V1I3L0A0 370 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 INPPL1O15357 1258 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 HRH2P25021 359 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 DGKGP49619 791 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 RGS1Q08116 209 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 MAD2L1BPQ15013 274 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-201ENST00000323668 SERPINA11Q86U17 422 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 AMZ2Q86W34 360 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 SLC5A8Q8N695 610 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 DEFB118Q96PH6 123 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 RDH14Q9HBH5 336 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 AASSQ9UDR5 926 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 GABRQQ9UN88 632 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 KIAA0513O60268 411 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 FBXW4P57775 412 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 LARS2Q15031 903 aaKnown RBP14.21□□□□□ -0.13
TCOF1-201ENST00000323668 APCDD1Q8J025 514 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 SLC5A11Q8WWX8 675 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 SLC9A6Q92581 669 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 KCNN2Q9H2S1 579 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 GPR83Q9NYM4 423 aa14.21□□□□□ -0.13
TCOF1-201ENST00000323668 FXYD1O00168 92 aa14.21□□□□□ -0.14
TCOF1-201ENST00000323668 PSKH1P11801 424 aa14.21□□□□□ -0.14
TCOF1-201ENST00000323668 LAMP2P13473 410 aa14.21□□□□□ -0.14
TCOF1-201ENST00000323668 VEZF1Q14119 521 aa14.21□□□□□ -0.14
TCOF1-201ENST00000323668 ZNF438Q7Z4V0 828 aa14.21□□□□□ -0.14
TCOF1-201ENST00000323668 FAM110BQ8TC76 370 aa14.21□□□□□ -0.14
TCOF1-201ENST00000323668 MAL2Q969L2 176 aa14.21□□□□□ -0.14
TCOF1-201ENST00000323668 SCRN2Q96FV2 425 aa14.21□□□□□ -0.14
TCOF1-201ENST00000323668 CCDC115Q96NT0 180 aa14.21□□□□□ -0.14
TCOF1-201ENST00000323668 SLC2A11Q9BYW1 496 aa14.21□□□□□ -0.14
TCOF1-201ENST00000323668 NEUROD4Q9HD90 331 aa14.21□□□□□ -0.14
TCOF1-201ENST00000323668 MRPL39Q9NYK5 338 aaKnown RBP14.21□□□□□ -0.14
TCOF1-201ENST00000323668 POP7O75817 140 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms