RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 GID4Q8IVV7 300 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 RHOXF1Q8NHV9 184 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 DDX1Q92499 740 aaKnown RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 NEURL2Q9BR09 285 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 TSSK6Q9BXA6 273 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 SOX17Q9H6I2 414 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 UNKLQ9H9P5 680 aaKnown RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 IL37Q9NZH6 218 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 CACNA1HO95180 2353 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 NLRC5Q86WI3 1866 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 GLYATL1P3A0A0U1RQE8 302 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 CLDN24A6NM45 220 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 IL3P08700 152 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 DDCP20711 480 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 FNTBP49356 437 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ABHD18Q0P651 414 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 NUDT18Q6ZVK8 323 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 LGI2Q8N0V4 545 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ZBED3Q96IU2 234 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 LURAP1Q96LR2 239 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF358Q9NW07 568 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 POLR1DQ9Y2S0 133 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 MATN3O15232 486 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 H1F0P07305 194 aaKnown RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 C8GP07360 202 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 GGT1P19440 569 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 GBX2P52951 348 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 BIKQ13323 160 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 TAF1AQ15573 450 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 CNIH2Q6PI25 160 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 DCBLD1Q8N8Z6 715 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 GPR151Q8TDV0 419 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 OR51J1Q9H342 316 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 TMEM185BQ9H7F4 350 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 A0A096LPI6 279 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 BHMG1C9JSJ3 638 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 FFAR2O15552 330 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 MMP10P09238 476 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 TACSTD2P09758 323 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 BMP4P12644 408 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 SRCP12931 536 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ETV4P43268 484 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 CTBP2P56545 445 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF33BQ06732 778 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 RBBP4Q09028 425 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ELOAQ14241 798 aaKnown RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 NDUFAF5Q5TEU4 345 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF772Q68DY9 489 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 PDE12Q6L8Q7 609 aaKnown RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 WDSUB1Q8N9V3 476 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ZDHHC12Q96GR4 267 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 MYO19Q96H55 970 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 RIPOR3Q96MK2 946 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 LMAN2LQ9H0V9 348 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 TCF7L1Q9HCS4 588 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ATP13A1Q9HD20 1204 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 TRAPPC13A5PLN9 417 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 MT-ND5P03915 603 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 ENGP17813 658 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 ADORA2AP29274 412 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 CEACAM7Q14002 265 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 TAF13Q15543 124 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 GLIS1Q8NBF1 620 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 RAD51AP1Q96B01 352 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 ABCG5Q9H222 651 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 DNAJC27Q9NZQ0 273 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 KLHL21Q9UJP4 597 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 FZD4Q9ULV1 537 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 WNK1Q9H4A3 2382 aa6.84□□□□□ -1.32
SMC1A-201ENST00000322213 ADAMTS7Q9UKP4 1686 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 C17orf102A2RUQ5 167 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 OR6C74A6NCV1 312 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 A8MX80 341 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 SCAMP3O14828 347 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 PCDHGA12O60330 932 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TSPAN3O60637 253 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 CTPS1P17812 591 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 MAOBP27338 520 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 DDOSTP39656 456 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 RGS8P57771 180 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 RPP38P78345 283 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 DPYSL5Q9BPU6 564 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 NT5DC2Q9H857 520 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 NOP16Q9Y3C1 178 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 PSAT1Q9Y617 370 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TRAV20A0A0B4J274 112 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 SLC12A8A0AV02 714 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 PTGER3P43115 390 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 DGKGP49619 791 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TAS2R39P59534 338 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 SSTP61278 116 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 GRIK2Q13002 908 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ATAT1Q5SQI0 421 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 RAB11FIP2Q7L804 512 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 LINC00116Q8NCU8 138 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 RHEBL1Q8TAI7 183 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 BCL7CQ8WUZ0 217 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 PHB2Q99623 299 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 MGLLQ99685 303 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms