RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 ASIC5Q9NY37 505 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 AHSPQ9NZD4 102 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 RAPGEFL1Q9UHV5 662 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 TRIM33Q9UPN9 1127 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 RUVBL1Q9Y265 456 aaKnown RBP12.97□□□□□ -0.33
PRPF18-201ENST00000320054 PTPRBP23467 1997 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 FITM1A5D6W6 292 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 H3BMH7 237 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 P2RX6O15547 441 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 SEC22BO75396 215 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 SMIM10L1P0DMW3 83 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 CEACAM1P13688 526 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 FOLR1P15328 257 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 RAP1GDS1P52306 607 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 GABPB1Q06547 395 aaPredicted RBP12.96□□□□□ -0.33
PRPF18-201ENST00000320054 TGM3Q08188 693 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 ACSM2AQ08AH3 577 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 KCNAB1Q14722 419 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 DEFB110Q30KQ9 67 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 GALNTL6Q49A17 601 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 RFTN2Q52LD8 501 aaPredicted RBP12.96□□□□□ -0.33
PRPF18-201ENST00000320054 WASHC2DQ5SRD0 308 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 ACSM2BQ68CK6 577 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 GALNT18Q6P9A2 607 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 CYB5D1Q6P9G0 228 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 B3GNT8Q7Z7M8 397 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 AGBL5Q8NDL9 886 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 OR2L5Q8NG80 312 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 OR8K5Q8NH50 307 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 N4BP2L2Q92802 583 aaPredicted RBP12.96□□□□□ -0.33
PRPF18-201ENST00000320054 APIPQ96GX9 242 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 SMIM10Q96HG1 83 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 MRPL1Q9BYD6 325 aaKnown RBP12.96□□□□□ -0.33
PRPF18-201ENST00000320054 REXO4Q9GZR2 422 aaKnown RBP12.96□□□□□ -0.33
PRPF18-201ENST00000320054 AICDAQ9GZX7 198 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 FANCEQ9HB96 536 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 FGF21Q9NSA1 209 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 MRGBPQ9NV56 204 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 SIDT1Q9NXL6 827 aaKnown RBP12.96□□□□□ -0.33
PRPF18-201ENST00000320054 HEY2Q9UBP5 337 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 GIMAP2Q9UG22 337 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 ADAM29Q9UKF5 820 aa12.96□□□□□ -0.33
PRPF18-201ENST00000320054 PTPRZ1P23471 2315 aaPredicted RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 E9PBE3 544 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 PLPP1O14494 284 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 UBDO15205 165 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 KLHL41O60662 606 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 CCDC22O60826 627 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 MYO1DO94832 1006 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 EIF2S1P05198 315 aaKnown RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 MAPK1P28482 360 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 CSTF2P33240 577 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 MRPL19P49406 292 aaKnown RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 ATP4BP51164 291 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 ITGA1P56199 1179 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 RPL38P63173 70 aaKnown RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 C16orf72Q14CZ0 275 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 TERF2Q15554 542 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 GPR19Q15760 415 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 GSTA3Q16772 222 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 HKDC1Q2TB90 917 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 GARNL3Q5VVW2 1013 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 TMEM214Q6NUQ4 689 aaKnown RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 TRIM40Q6P9F5 258 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 ABHD17CQ6PCB6 329 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 PAGE2Q7Z2X7 111 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 UBE3DQ7Z6J8 389 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 SLCO6A1Q86UG4 719 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 BPHLQ86WA6 291 aaPredicted RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 CACTIN-AS1Q8N1I8 211 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 ARHGEF39Q8N4T4 335 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 C1orf52Q8N6N3 182 aaKnown RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 FNDC5Q8NAU1 212 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 KCT2Q8NC54 265 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 RCBTB1Q8NDN9 531 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 ZNF501Q96CX3 271 aaPredicted RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 QRFPRQ96P65 431 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 KCNC2Q96PR1 638 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 MACROD1Q9BQ69 325 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 TBCDQ9BTW9 1192 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 ZNF717Q9BY31 904 aaPredicted RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 STRADBQ9C0K7 418 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 ROGDIQ9GZN7 287 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 KLHL31Q9H511 634 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 DDX31Q9H8H2 851 aaKnown RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 NOP53Q9NZM5 478 aaKnown RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 SERTAD3Q9UJW9 196 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 EIF3LQ9Y262 564 aaKnown RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 SLC22A7Q9Y694 548 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 CNOT1A5YKK6 2376 aaKnown RBP12.95□□□□□ -0.34
PRPF18-201ENST00000320054 CROCCQ5TZA2 2017 aa12.95□□□□□ -0.34
PRPF18-201ENST00000320054 FER1L5A0AVI2 2057 aa12.94□□□□□ -0.34
PRPF18-201ENST00000320054 TMEM150CB9EJG8 249 aa12.94□□□□□ -0.34
PRPF18-201ENST00000320054 ERI3O43414 337 aaKnown RBP12.94□□□□□ -0.34
PRPF18-201ENST00000320054 SH3BGRLO75368 114 aa12.94□□□□□ -0.34
PRPF18-201ENST00000320054 DCTN3O75935 186 aa12.94□□□□□ -0.34
PRPF18-201ENST00000320054 OR2B3O76000 313 aa12.94□□□□□ -0.34
PRPF18-201ENST00000320054 SCELO95171 688 aa12.94□□□□□ -0.34
PRPF18-201ENST00000320054 MT-CO3P00414 261 aa12.94□□□□□ -0.34
PRPF18-201ENST00000320054 STATHP02808 62 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms