RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 COL9A2Q14055 689 aaPredicted RBP14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 ANGPTL8Q6UXH0 198 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 NEDD4LQ96PU5 975 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 TTYH2Q9BSA4 534 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 SLC12A9Q9BXP2 914 aa14.98□□□□□ -0.01
SHROOM1-201ENST00000319854 SAGE2PA6NJ88 616 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 K7ESM1 405 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 RGS10O43665 173 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 TIMP2P16035 220 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 MRPS15P82914 257 aaKnown RBP14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 PON2Q15165 354 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 SIGIRRQ6IA17 410 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 ZCCHC8Q6NZY4 707 aaKnown RBP14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 FAM180BQ6P0A1 224 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 AHSA2Q719I0 299 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 C12orf40Q86WS4 652 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 SYT12Q8IV01 421 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 CCDC71Q8IV32 467 aaPredicted RBP14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 TMEM159Q96B96 161 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 AP2M1Q96CW1 435 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 ST6GAL2Q96JF0 529 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 LYSMD1Q96S90 227 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 NRTNQ99748 197 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 DNAJC11Q9NVH1 559 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 TRPS1Q9UHF7 1281 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 CARD8Q9Y2G2 431 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 F5P12259 2224 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 MYO15AQ9UKN7 3530 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 ARHGEF33A8MVX0 844 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 M0R082 166 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 RFXANKO14593 260 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 TLL1O43897 1013 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 AIREO43918 545 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 CEBPBP17676 345 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 DAPP51397 102 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 MEF2AQ02078 507 aaPredicted RBP14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 MAD2L1Q13257 205 aaPredicted RBP14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 GTF2H3Q13889 308 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 CDK10Q15131 360 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 ZNF284Q2VY69 593 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 ARHGAP15Q53QZ3 475 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 FRG2Q64ET8 278 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 PNCKQ6P2M8 343 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 TMEM220Q6QAJ8 160 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 TRIM46Q7Z4K8 759 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 CLECL1Q8IZS7 167 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 FRG2BQ96QU4 278 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 SDHCQ99643 169 aaPredicted RBP14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 CLMPQ9H6B4 373 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 ARNTLO00327 626 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 ZW10O43264 779 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 SEMA3DO95025 777 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 SLC16A8O95907 504 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 IL6P05231 212 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 CD22P20273 847 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 IGFBP5P24593 272 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 KRT20P35900 424 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 MRPL19P49406 292 aaKnown RBP14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 FADDQ13158 208 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 STARD3Q14849 445 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 CEP78Q5JTW2 689 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 TRAPPC5Q8IUR0 188 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 MRPL43Q8N983 215 aaKnown RBP14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 RASGEF1AQ8N9B8 481 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 HCAR2Q8TDS4 363 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 ASZ1Q8WWH4 475 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 USP7Q93009 1102 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 PANX1Q96RD7 426 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 C11orf49Q9H6J7 331 aa14.97□□□□□ -0.01
SHROOM1-201ENST00000319854 A0A096LPI6 279 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 CLDN24A6NM45 220 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 AGAP14A8MT82 685 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 MYO1GB0I1T2 1018 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 AGRPO00253 132 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 FAM20BO75063 409 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 NPPAP01160 153 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 SYN1P17600 705 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 C21orf33P30042 268 aaPredicted RBP14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 BCL7AQ4VC05 210 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 ADHFE1Q8IWW8 467 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 SNX18Q96RF0 628 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 ACAT2Q9BWD1 397 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 SCN3BQ9NY72 215 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 PCDHGB6Q9Y5F9 930 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 MAU2Q9Y6X3 613 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 ERVH48-1M5A8F1 160 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 ENDOUP21128 410 aaKnown RBP14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 METTL3Q86U44 580 aaKnown RBP14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 GALNT12Q8IXK2 581 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 CFAP206Q8IYR0 622 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 SLC38A6Q8IZM9 456 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 DEPDC4Q8N2C3 294 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 RDH14Q9HBH5 336 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 TRIM39Q9HCM9 518 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 ERVK13-1Q9NX77 482 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 PAQR5Q9NXK6 330 aaPredicted RBP14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 EHD3Q9NZN3 535 aa14.96□□□□□ -0.01
SHROOM1-201ENST00000319854 MRPS23Q9Y3D9 190 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms