RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 MGAT4BQ9UQ53 548 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 KCNK6Q9Y257 313 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 KMOO15229 486 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 UBXN7O94888 489 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 HLA-DPB1P04440 258 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 BMP2P12643 396 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 XKR4Q5GH76 650 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 NIPAL1Q6NVV3 410 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 LINGO2Q7L985 606 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 GRHL3Q8TE85 626 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 NRG4Q8WWG1 115 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 EFHD2Q96C19 240 aaPredicted RBP13.31□□□□□ -0.28
SPAST-201ENST00000315285 TMEM80Q96HE8 168 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 ZBED3Q96IU2 234 aaPredicted RBP13.31□□□□□ -0.28
SPAST-201ENST00000315285 DOHHQ9BU89 302 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 TAS2R9Q9NYW1 312 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 ALS2Q96Q42 1657 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 MBLAC1A4D2B0 266 aaPredicted RBP13.3□□□□□ -0.28
SPAST-201ENST00000315285 MYADML2A6NDP7 307 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 DNAJB5O75953 348 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 HLA-EP13747 358 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 ZNF3P17036 446 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 DCDC1P59894 354 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 DNASE1L3Q13609 305 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 WSCD2Q2TBF2 565 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 RTP2Q5QGT7 225 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 BPIFB1Q8TDL5 484 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 METTL21AQ8WXB1 218 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 GLYATL1Q969I3 302 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 FAM129BQ96TA1 746 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 SLC30A2Q9BRI3 323 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 PDCD5O14737 125 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 CD2P06729 351 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 TIA1P31483 386 aaKnown RBP eCLIP13.3□□□□□ -0.28
SPAST-201ENST00000315285 ST3GAL4Q11206 333 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 CBLBQ13191 982 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 GHDCQ8N2G8 530 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 CAMKVQ8NCB2 501 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 CHST4Q8NCG5 386 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 TSSK6Q9BXA6 273 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 GSTO2Q9H4Y5 243 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 SDR39U1Q9NRG7 319 aaPredicted RBP13.3□□□□□ -0.28
SPAST-201ENST00000315285 STOML2Q9UJZ1 356 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 PCDHGB1Q9Y5G3 927 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 M0QZQ0 153 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 RCBTB2O95199 551 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 C8orf89P0DMQ9 161 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 HSD3B1P14060 373 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 JUPP14923 745 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 HSD3B2P26439 372 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 IL12BP29460 328 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 HTR6P50406 440 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 LSAMPQ13449 338 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 CYP27C1Q4G0S4 372 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 LDLRAD1Q5T700 205 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 GRASPQ7Z6J2 395 aaPredicted RBP13.3□□□□□ -0.28
SPAST-201ENST00000315285 PTERQ96BW5 349 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 ZSWIM3Q96MP5 696 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 MGME1Q9BQP7 344 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 MS4A12Q9NXJ0 267 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 PCDHB11Q9Y5F2 797 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 CHD4Q14839 1912 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 K7ERQ8 282 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 CAPN5O15484 640 aaPredicted RBP13.3□□□□□ -0.28
SPAST-201ENST00000315285 MATN1P21941 496 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 AHCYP23526 432 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 MAP2K4P45985 399 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 CLCN7P51798 805 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 CLDN8P56748 225 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 RPP38P78345 283 aaKnown RBP13.3□□□□□ -0.28
SPAST-201ENST00000315285 TXNL4AP83876 142 aaKnown RBP13.3□□□□□ -0.28
SPAST-201ENST00000315285 ZCCHC12Q6PEW1 402 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 NCEH1Q6PIU2 408 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 SCD5Q86SK9 330 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 PRSS58Q8IYP2 241 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 BARD1Q99728 777 aaKnown RBP13.3□□□□□ -0.28
SPAST-201ENST00000315285 TMED9Q9BVK6 235 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 MMP27Q9H306 513 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 MARK1Q9P0L2 795 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 ERVK-18Q9QC07 812 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 MED31Q9Y3C7 131 aa13.3□□□□□ -0.28
SPAST-201ENST00000315285 ELOA3DA6NLF2 546 aaPredicted RBP13.29□□□□□ -0.28
SPAST-201ENST00000315285 FSHRP23945 695 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 ERVPABLB-1P60509 514 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 GRSF1Q12849 480 aaKnown RBP eCLIP13.29□□□□□ -0.28
SPAST-201ENST00000315285 ELOA3BQ3SY89 546 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 ELOA3Q8NG57 546 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 FAM118AQ9NWS6 357 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 RHPN2P1A8MT19 583 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 PENKP01210 267 aaPredicted RBP13.29□□□□□ -0.28
SPAST-201ENST00000315285 C1GALT1C1LP0DN25 315 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 GGT1P19440 569 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 UQCRC2P22695 453 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 RBBP4Q09028 425 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 ZNF805Q5CZA5 627 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 PAMR1Q6UXH9 720 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 ASB18Q6ZVZ8 466 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 C7orf61Q8IZ16 206 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 TRAM1L1Q8N609 369 aa13.29□□□□□ -0.28
SPAST-201ENST00000315285 TAPBPLQ9BX59 468 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms