RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ERVH48-1M5A8F1 160 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 ARHGAP33O14559 1287 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 TFECO14948 347 aaPredicted RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 CAPN5O15484 640 aaPredicted RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 SLC11A1P49279 550 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 CASP9P55211 416 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 OLR1P78380 273 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 SLAMF1Q13291 335 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 DDX39BQ13838 428 aaKnown RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 EIF4HQ15056 248 aaKnown RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 ATP13A5Q4VNC0 1218 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 LRRC66Q68CR7 880 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 RFLNAQ6ZTI6 216 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 SIX5Q8N196 739 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 CBARPQ8N350 705 aaPredicted RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 CADM2Q8N3J6 435 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 FYTTD1Q96QD9 318 aaKnown RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 COPS8Q99627 209 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 C19orf43Q9BQ61 176 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 KLF16Q9BXK1 252 aaPredicted RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 ROGDIQ9GZN7 287 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 POFUT2Q9Y2G5 429 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 PRAMEF25A6NGN4 478 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 C8GP07360 202 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 ANXA8P13928 327 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 HMGA1P17096 107 aaKnown RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 RPL17P18621 184 aaKnown RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 PCGF2P35227 344 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 SOX6P35712 828 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 CDH12P55289 794 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 PFN3P60673 137 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 FKBP1BP68106 108 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 CSTF3Q12996 717 aaKnown RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 MICAQ29983 383 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 EXOC3L2Q2M3D2 409 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 TRAF7Q6Q0C0 670 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 C19orf48Q6RUI8 117 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 ATCAYQ86WG3 371 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 LGI4Q8N135 537 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 DEPDC4Q8N2C3 294 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 OR9Q2Q8NGE9 314 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 C2orf15Q8WU43 125 aaKnown RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 C11orf24Q96F05 449 aaPredicted RBP12.93□□□□□ -0.34
SKA3-202ENST00000314759 CRELD1Q96HD1 420 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 GDF15Q99988 308 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 SPATA9Q9BWV2 254 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 KLHL42Q9P2K6 505 aa12.93□□□□□ -0.34
SKA3-202ENST00000314759 TBKBP1A7MCY6 615 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 PLK4O00444 970 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 SCAMP2O15127 329 aaKnown RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 SH3BGRLO75368 114 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 POU2F1P14859 743 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 DDOSTP39656 456 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 SPIBQ01892 262 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 STARD3Q14849 445 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 MED22Q15528 200 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 HKDC1Q2TB90 917 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 CEP78Q5JTW2 689 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 CRTC1Q6UUV9 634 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 ZNF517Q6ZMY9 492 aaPredicted RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 ZNF438Q7Z4V0 828 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 C2orf69Q8N8R5 385 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 C11orf65Q8NCR3 313 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 PIK3R3Q92569 461 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 RNF170Q96K19 258 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 PHOX2BQ99453 314 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 MGLLQ99685 303 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 MMP28Q9H239 520 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 IMPAD1Q9NX62 359 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 TNFSF8P32971 234 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 C21orf58P58505 322 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 GNG2P59768 71 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 IRF8Q02556 426 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 TEKQ02763 1124 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 ACSM2AQ08AH3 577 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 TSTQ16762 297 aaKnown RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 CYP27C1Q4G0S4 372 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 CPTPQ5TA50 214 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 ACSM2BQ68CK6 577 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 ZNF367Q7RTV3 350 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 WDR20Q8TBZ3 569 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 TRNT1Q96Q11 434 aaKnown RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 SLC30A2Q9BRI3 323 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 IRF2BPLQ9H1B7 796 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 RANGRFQ9HD47 186 aaPredicted RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 GPATCH2Q9NW75 528 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 SPATA6Q9NWH7 488 aaPredicted RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 DUSP12Q9UNI6 340 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 RUVBL1Q9Y265 456 aaKnown RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 CFL2Q9Y281 166 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 GFYI3L273 518 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 SEPT4O43236 478 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 CELF2O95319 508 aaKnown RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 ETHE1O95571 254 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 ABCB1P08183 1280 aaPredicted RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 AZGP1P25311 298 aaKnown RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 RAE1P78406 368 aaKnown RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 CDH18Q13634 790 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 BAK1Q16611 211 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms