RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 DEFA1P59665 94 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 DEFA3P59666 94 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 LAPTM4AQ15012 233 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 SLC9B2Q86UD5 537 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 PDZD3Q86UT5 571 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 PEX5LQ8IYB4 626 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 PRSS58Q8IYP2 241 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 GPR151Q8TDV0 419 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 ZNF480Q8WV37 535 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 GEMIN6Q8WXD5 167 aaKnown RBP13.14□□□□□ -0.31
PAAF1-201ENST00000310571 EP400Q96L91 3159 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 OR7A17O14581 309 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 SCAMP2O15127 329 aaKnown RBP13.14□□□□□ -0.31
PAAF1-201ENST00000310571 HOXC11O43248 304 aaPredicted RBP13.14□□□□□ -0.31
PAAF1-201ENST00000310571 RGS10O43665 173 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 CPOXP36551 454 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 CDKL1Q00532 357 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 TRIM16LQ309B1 348 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 LILRA6Q6PI73 481 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 GPR149Q86SP6 731 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 VRK3Q8IV63 474 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 DPH2Q9BQC3 489 aaPredicted RBP13.14□□□□□ -0.31
PAAF1-201ENST00000310571 APOOQ9BUR5 198 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 TMEM181Q9P2C4 612 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 CA14Q9ULX7 337 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 GTF2A1LQ9UNN4 478 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 F5P12259 2224 aa13.14□□□□□ -0.31
PAAF1-201ENST00000310571 DUXAA6NLW8 204 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 OR52A4PA6NMU1 304 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 SEMA4FO95754 770 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 ALPPL2P10696 532 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 SDC1P18827 310 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 IRF4Q15306 451 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 MED22Q15528 200 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 TIMM50Q3ZCQ8 353 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 LCN8Q6JVE9 175 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 FAM20CQ8IXL6 584 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 SLC2A4RGQ9NR83 387 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 GEMIN8Q9NWZ8 242 aaKnown RBP13.13□□□□□ -0.31
PAAF1-201ENST00000310571 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 LSM1O15116 133 aaKnown RBP13.13□□□□□ -0.31
PAAF1-201ENST00000310571 ALPPP05187 535 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 RPL4P36578 427 aaKnown RBP13.13□□□□□ -0.31
PAAF1-201ENST00000310571 ALDH3A2P51648 485 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 HK3P52790 923 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 CLDN2P57739 230 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 LASP1Q14847 261 aaKnown RBP13.13□□□□□ -0.31
PAAF1-201ENST00000310571 FBXO43Q4G163 708 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 C9orf50Q5SZB4 431 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 LGI4Q8N135 537 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 TMEM125Q96AQ2 219 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 CHFRQ96EP1 664 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 NODALQ96S42 347 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 GPATCH1Q9BRR8 931 aaKnown RBP13.13□□□□□ -0.31
PAAF1-201ENST00000310571 SMURF2Q9HAU4 748 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 HEBP1Q9NRV9 189 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 SCML1Q9UN30 329 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 NUMBLQ9Y6R0 609 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 KRT87PA6NCN2 255 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 OR6C74A6NCV1 312 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 C1orf105O95561 183 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 CLIC3O95833 236 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 CD72P21854 359 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 RYKP34925 604 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 PGDP52209 483 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 ABATP80404 500 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 ATP6AP1Q15904 470 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 DUSP6Q16828 381 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 ADGRD2Q7Z7M1 963 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 ZCCHC7Q8N3Z6 543 aaKnown RBP13.13□□□□□ -0.31
PAAF1-201ENST00000310571 RNF175Q8N4F7 328 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 LMNTD1Q8N9Z9 388 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 KCT2Q8NC54 265 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 FBXO15Q8NCQ5 510 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-201ENST00000310571 PROKR1Q8TCW9 393 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 INPP5KQ9BT40 448 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 TMEM27Q9HBJ8 222 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 PHF11Q9UIL8 331 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 PCDHB14Q9Y5E9 798 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 ANXA8P13928 327 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 CDH15P55291 814 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 DCDC1P59894 354 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 FAM92BQ6ZTR7 304 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 MRPL38Q96DV4 380 aaKnown RBP13.13□□□□□ -0.31
PAAF1-201ENST00000310571 CAMK1GQ96NX5 476 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 ABCG4Q9H172 646 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 EPB41L1Q9H4G0 881 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 EVA1BQ9NVM1 165 aa13.13□□□□□ -0.31
PAAF1-201ENST00000310571 MAN2B1O00754 1011 aa13.12□□□□□ -0.31
PAAF1-201ENST00000310571 AVPR1BP47901 424 aa13.12□□□□□ -0.31
PAAF1-201ENST00000310571 SNAPC1Q16533 368 aa13.12□□□□□ -0.31
PAAF1-201ENST00000310571 ANKRD54Q6NXT1 300 aa13.12□□□□□ -0.31
PAAF1-201ENST00000310571 KCTD8Q6ZWB6 473 aa13.12□□□□□ -0.31
PAAF1-201ENST00000310571 RNF44Q7L0R7 432 aa13.12□□□□□ -0.31
PAAF1-201ENST00000310571 DPP10Q8N608 796 aa13.12□□□□□ -0.31
PAAF1-201ENST00000310571 HCAR2Q8TDS4 363 aa13.12□□□□□ -0.31
PAAF1-201ENST00000310571 MRPL48Q96GC5 212 aaKnown RBP13.12□□□□□ -0.31
PAAF1-201ENST00000310571 FBXL20Q96IG2 436 aa13.12□□□□□ -0.31
PAAF1-201ENST00000310571 TPSD1Q9BZJ3 242 aa13.12□□□□□ -0.31
PAAF1-201ENST00000310571 PRDM8Q9NQV8 689 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms