RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ZDHHC2Q9UIJ5 367 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 PSMD13Q9UNM6 376 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 CCL26Q9Y258 94 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 RPH3AQ9Y2J0 694 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 IFT52Q9Y366 437 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 NUMBLQ9Y6R0 609 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ZNF780BQ9Y6R6 833 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ISM1B1AKI9 464 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 FOXE1O00358 373 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 RFXANKO14593 260 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 SERPINB7O75635 380 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 SERPIND1P05546 499 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 PIM1P11309 404 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 DRD2P14416 443 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ITGB8P26012 769 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 VARSP26640 1264 aaKnown RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ARNTP27540 789 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 CTSOP43234 321 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 CLCNKAP51800 687 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ATXN3P54252 364 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 RPS15AP62244 130 aaKnown RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 RPP30P78346 268 aaKnown RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 PTSQ03393 145 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 KIR2DS3Q14952 304 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ZMYND11Q15326 602 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 CCDC58Q4VC31 144 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 C9orf50Q5SZB4 431 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 C9orf64Q5T6V5 341 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ATG9BQ674R7 924 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 KIAA0895LQ68EN5 471 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 HSD11B1LQ7Z5J1 315 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 TECPR1Q7Z6L1 1165 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 DPPA2Q7Z7J5 298 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 PIM3Q86V86 326 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 SETD9Q8NE22 299 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 PIK3R3Q92569 461 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 RCN3Q96D15 328 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ASB9Q96DX5 294 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ZBED6CLQ96FA7 236 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ZNF607Q96SK3 696 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 APOOQ9BUR5 198 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 C1orf50Q9BV19 199 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 KCNH6Q9H252 994 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 UBE2ZQ9H832 354 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 AKTIPQ9H8T0 292 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 CARS2Q9HA77 564 aaKnown RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 IMP3Q9NV31 184 aaKnown RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 CDH22Q9UJ99 828 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 INTS6Q9UL03 887 aaKnown RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 POLR3HQ9Y535 204 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 TCRBV21S2A2A0A5A6 115 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 TTC24A2A3L6 582 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 GSAPA4D1B5 854 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 IGLON5A6NGN9 336 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 MID1O15344 667 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ITM2AO43736 263 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 FAM58BPP0C7Q3 252 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 C7P10643 843 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 RRM2P31350 389 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 P2RY2P41231 377 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ARRB1P49407 418 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 RAB28P51157 221 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 CDK3Q00526 305 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 RBBP4Q09028 425 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 PDK3Q15120 406 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 PTCHD3Q3KNS1 767 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 IRAK1BP1Q5VVH5 260 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 CCBE1Q6UXH8 406 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 SLC51BQ86UW2 128 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 MINDY1Q8N5J2 469 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ENKURQ8TC29 256 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 FRS2Q8WU20 508 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 RIT1Q92963 219 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 HEBP1Q9NRV9 189 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ARMCX1Q9P291 453 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 SLC17A6Q9P2U8 582 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ZNF225Q9UK10 706 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 PPT2Q9UMR5 302 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 YBX2Q9Y2T7 364 aaKnown RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 COPG1Q9Y678 874 aaKnown RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 FOXO6A8MYZ6 492 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 EEDO75530 441 aaKnown RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 PRKCGP05129 697 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ANXA4P09525 319 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 UQCRBP14927 111 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 SOAT1P35610 550 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 CCR2P41597 374 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ENTPD1P49961 510 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 CAPZA1P52907 286 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 PSPHP78330 225 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 HTR4Q13639 388 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 UBAP2LQ14157 1087 aaKnown RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 UBXN2BQ14CS0 331 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 OR4D1Q15615 310 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 ZNHIT3Q15649 155 aaPredicted RBP5.79□□□□□ -1.48
SEC22A-201ENST00000309934 LRIT3Q3SXY7 679 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 C2orf27AQ580R0 203 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 MANEAQ5SRI9 462 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 CCNYL2Q5T2Q4 361 aa5.79□□□□□ -1.48
SEC22A-201ENST00000309934 NXPE4Q6UWF7 544 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms