RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TMTC4Q5T4D3 741 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 HES3Q5TGS1 186 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 CD276Q5ZPR3 534 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 NADSYN1Q6IA69 706 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ESRP1Q6NXG1 681 aaKnown RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 NCEH1Q6PIU2 408 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 CNSTQ6PJW8 725 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SERPINA13PQ6UXR4 307 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 LINC00299Q6ZSB3 139 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 CHST9Q7L1S5 443 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SPATA19Q7Z5L4 167 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 GPR141Q7Z602 305 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 CUZD1Q86UP6 607 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 TMPRSS12Q86WS5 348 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 PTRH1Q86Y79 214 aaKnown RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 GALNT13Q8IUC8 556 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 CEP97Q8IW35 865 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ARHGAP12Q8IWW6 846 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 TBC1D21Q8IYX1 336 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 GALNT4Q8N4A0 578 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ATPAF2Q8N5M1 289 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 AADATQ8N5Z0 425 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 PDPRQ8NCN5 879 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ACVR1CQ8NER5 493 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 TRPV3Q8NET8 790 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 GPR150Q8NGU9 434 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 HMGCLL1Q8TB92 370 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 LRTOMTQ8WZ04 291 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SLCO4A1Q96BD0 722 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SGF29Q96ES7 293 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 TMA16Q96EY4 203 aaKnown RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ATXN7L3BQ96GX2 97 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 CENPNQ96H22 339 aaPredicted RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 VPS50Q96JG6 964 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ELMO2Q96JJ3 720 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 C1orf74Q96LT6 269 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 NPAS2Q99743 824 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 OMDQ99983 421 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 TMEM79Q9BSE2 394 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 TRIM54Q9BYV2 358 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 RSPH9Q9H1X1 276 aaPredicted RBP4.74□□□□□ -1.65
CKS1B-201ENST00000308987 GSTO2Q9H4Y5 243 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 RETREG1Q9H6L5 497 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 MAGEE1Q9HCI5 957 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 PREBQ9HCU5 417 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 AGPAT4Q9NRZ5 378 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ABCB8Q9NUT2 735 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SFMBT1Q9UHJ3 866 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ZNF639Q9UID6 485 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 STOML2Q9UJZ1 356 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 APPL1Q9UKG1 709 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 OAZ3Q9UMX2 235 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ZNF510Q9Y2H8 683 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 SNX13Q9Y5W8 968 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 NOTCH2Q04721 2471 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ANKRD36A6QL64 1941 aa4.74□□□□□ -1.65
CKS1B-201ENST00000308987 ZFC3H1O60293 1989 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 TEP1Q99973 2627 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 CACNA1DQ01668 2161 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 SYNJ2BP-COX16A0A087WUM0 186 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 A0A1W2PPC4 97 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 DHRS12A0PJE2 317 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 E9PAM4 449 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 H0YAE9 185 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 STX16-NPEPL1H3BU86 382 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 I6L893 689 aaPredicted RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 IFRD1O00458 451 aaPredicted RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 MID1O15344 667 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 IRAK2O43187 625 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 PFDN1O60925 122 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 RFPL3O75679 317 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 RASAL1O95294 804 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 IGLV3-27P01718 113 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 JUNP05412 331 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 GIMD1P0DJR0 217 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 SLC2A3P11169 496 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ACADMP11310 421 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 PABPC1P11940 636 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 IDO1P14902 403 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 JUPP14923 745 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ZNF12P17014 697 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 TPH1P17752 444 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 CD9P21926 228 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 PSMA4P25789 261 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ACRV1P26436 265 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 DCKP27707 260 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 EPHA8P29322 1005 aaPredicted RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 HMOX2P30519 316 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 CCR1P32246 355 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 CSKP41240 450 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 CCR10P46092 362 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 SERPINH1P50454 418 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 RENBPP51606 427 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 SLC7A2P52569 658 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 NDST2P52849 883 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 RPS24P62847 133 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 HERVK_113P63132 956 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 MERTKQ12866 999 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 MTA1Q13330 715 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 CTBP1Q13363 440 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms