RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 GPC6Q9Y625 555 aaPredicted RBP20.04■□□□□ 0.8
RELA-201ENST00000308639 CHD7Q9P2D1 2997 aa20.04■□□□□ 0.8
RELA-201ENST00000308639 NPC1O15118 1278 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 PRMT3O60678 531 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 TGFB1P01137 390 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 METAP1P53582 386 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 ADIPOR2Q86V24 386 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 NFKBIDQ8NI38 313 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 PSMA8Q8TAA3 256 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 ZHX1-C8orf76Q96EF9 292 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 DOHHQ9BU89 302 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 OR51B5Q9H339 312 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 EPS8L2Q9H6S3 715 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 ADPRHL2Q9NX46 363 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 SERTM1A2A2V5 107 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 RFPL2O75678 378 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 C8AP07357 584 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 ZNF8P17098 575 aaPredicted RBP20.03■□□□□ 0.8
RELA-201ENST00000308639 GADD45AP24522 165 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 PPIGQ13427 754 aaKnown RBP eCLIP20.03■□□□□ 0.84e-7■■□□□ 12.7
RELA-201ENST00000308639 SVOPQ8N4V2 548 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 C2orf73Q8N5S3 287 aaPredicted RBP20.03■□□□□ 0.8
RELA-201ENST00000308639 WDR48Q8TAF3 677 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 CHTF18Q8WVB6 975 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 HRASLS5Q96KN8 279 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 NRTNQ99748 197 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 SPNS1Q9H2V7 528 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 MAP4K5Q9Y4K4 846 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 HCFC2Q9Y5Z7 792 aa20.03■□□□□ 0.8
RELA-201ENST00000308639 H0YIV9 168 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 TIMP2P16035 220 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 VIPR1P32241 457 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 SPIBQ01892 262 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 GRIN2CQ14957 1233 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 RASGRP3Q8IV61 690 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 UTP15Q8TED0 518 aaKnown RBP20.02■□□□□ 0.8
RELA-201ENST00000308639 WRAP53Q9BUR4 548 aaKnown RBP20.02■□□□□ 0.8
RELA-201ENST00000308639 MIR1-1HGQ9H1L0 117 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 DCSTAMPQ9H295 470 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 RHCGQ9UBD6 479 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 OXSR1O95747 527 aaPredicted RBP20.02■□□□□ 0.8
RELA-201ENST00000308639 CLK1P49759 484 aaKnown RBP20.02■□□□□ 0.8
RELA-201ENST00000308639 TLE2Q04725 743 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 SLC13A2Q13183 592 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 MPEG1Q2M385 716 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 EXOC3L2Q2M3D2 409 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 HENMT1Q5T8I9 393 aaKnown RBP20.02■□□□□ 0.8
RELA-201ENST00000308639 TMEM220Q6QAJ8 160 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 C11orf65Q8NCR3 313 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 OR10G2Q8NGC3 310 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 EPYCQ99645 322 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 TCF25Q9BQ70 676 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 SORBS1Q9BX66 1292 aaKnown RBP20.02■□□□□ 0.8
RELA-201ENST00000308639 GULP1Q9UBP9 304 aa20.02■□□□□ 0.8
RELA-201ENST00000308639 STSP08842 583 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 TYRP14679 529 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 MAGP20916 626 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 TGM1P22735 817 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 TIA1P31483 386 aaKnown RBP eCLIP20.01■□□□□ 0.79
RELA-201ENST00000308639 GANABQ14697 944 aaKnown RBP20.01■□□□□ 0.79
RELA-201ENST00000308639 CARTPTQ16568 116 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 TRIM60Q495X7 471 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 DDX53Q86TM3 631 aaKnown RBP20.01■□□□□ 0.79
RELA-201ENST00000308639 SYTL1Q8IYJ3 562 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 GGHQ92820 318 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 SLC35A5Q9BS91 424 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 EMILIN2Q9BXX0 1053 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 DSN1Q9H410 356 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 TRPV5Q9NQA5 729 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 FBXO8Q9NRD0 319 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 PCDHGB3Q9Y5G1 929 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 UNC80Q8N2C7 3258 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 LOC100506127A0A0U1RQW1 187 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 FAM227AF5H4B4 570 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 DBTP11182 482 aaKnown RBP20.01■□□□□ 0.79
RELA-201ENST00000308639 HOXB6P17509 224 aaKnown RBP20.01■□□□□ 0.79
RELA-201ENST00000308639 RECQLP46063 649 aaPredicted RBP20.01■□□□□ 0.79
RELA-201ENST00000308639 EIF2B2P49770 351 aaKnown RBP20.01■□□□□ 0.79
RELA-201ENST00000308639 POLR2LP62875 67 aaKnown RBP20.01■□□□□ 0.79
RELA-201ENST00000308639 SELENOWP63302 87 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 STARD3Q14849 445 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 COLEC12Q5KU26 742 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 SLC22A16Q86VW1 577 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 CPA6Q8N4T0 437 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 ZNF740Q8NDX6 193 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 MCFD2Q8NI22 146 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 ITPAQ9BY32 194 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 BTNL2Q9UIR0 455 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 OSGIN1Q9UJX0 560 aa20.01■□□□□ 0.79
RELA-201ENST00000308639 KPNA5O15131 536 aa20■□□□□ 0.79
RELA-201ENST00000308639 UGDHO60701 494 aa20■□□□□ 0.79
RELA-201ENST00000308639 ADRA2AP08913 450 aa20■□□□□ 0.79
RELA-201ENST00000308639 PCGF2P35227 344 aa20■□□□□ 0.79
RELA-201ENST00000308639 HNF4AP41235 474 aa20■□□□□ 0.79
RELA-201ENST00000308639 HNRNPFP52597 415 aaKnown RBP20■□□□□ 0.79
RELA-201ENST00000308639 TBPL1P62380 186 aa20■□□□□ 0.79
RELA-201ENST00000308639 NOGQ13253 232 aa20■□□□□ 0.79
RELA-201ENST00000308639 CLPPQ16740 277 aaPredicted RBP20■□□□□ 0.79
RELA-201ENST00000308639 ZNF480Q8WV37 535 aa20■□□□□ 0.79
RELA-201ENST00000308639 GTPBP3Q969Y2 492 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms