RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 SYT6Q5T7P8 510 aaPredicted RBP10.52□□□□□ -0.72
LSM3-201ENST00000306024 TSTD2Q5T7W7 516 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 SPNS2Q8IVW8 549 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 LRRC17Q8N6Y2 441 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 ISL2Q96A47 359 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 C1QTNF1Q9BXJ1 281 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 DPY30Q9C005 99 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 TNFRSF12AQ9NP84 129 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 NDRG2Q9UN36 371 aaKnown RBP10.52□□□□□ -0.72
LSM3-201ENST00000306024 PCDHA9Q9Y5H5 950 aa10.52□□□□□ -0.72
LSM3-201ENST00000306024 ATG2BQ96BY7 2078 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 ANKRD66B4E2M5 251 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 MUSKO15146 869 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 KAT7O95251 611 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 SBK3P0C264 359 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 SRCP12931 536 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 DCTP40126 519 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 SLC6A11P48066 632 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 ISL1P61371 349 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 PYCR3Q53H96 274 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 PRSS36Q5K4E3 855 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 IL27RAQ6UWB1 636 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 ARSKQ6UWY0 536 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 PAMR1Q6UXH9 720 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 PRSS48Q7RTY5 328 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 MFSD6LQ8IWD5 586 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 ZNF683Q8IZ20 524 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 PAPD5Q8NDF8 572 aaKnown RBP10.52□□□□□ -0.73
LSM3-201ENST00000306024 PPP1R16AQ96I34 528 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 MGME1Q9BQP7 344 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 PPIL3Q9H2H8 161 aaKnown RBP10.52□□□□□ -0.73
LSM3-201ENST00000306024 C12orf10Q9HB07 376 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 CATSPERZQ9NTU4 200 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 MRPL39Q9NYK5 338 aaKnown RBP10.52□□□□□ -0.73
LSM3-201ENST00000306024 RDH8Q9NYR8 311 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 SLC2A6Q9UGQ3 507 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 OAS3Q9Y6K5 1087 aaKnown RBP10.52□□□□□ -0.73
LSM3-201ENST00000306024 CLCA3PQ9Y6N3 262 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 LRRC14BA6NHZ5 514 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 FXYD1O00168 92 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 KIAA0513O60268 411 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 ZNF780AO75290 641 aaPredicted RBP10.52□□□□□ -0.73
LSM3-201ENST00000306024 PRNPP04156 253 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 BMP8BP34820 402 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 POLD2P49005 469 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 DLX2Q07687 328 aaPredicted RBP10.52□□□□□ -0.73
LSM3-201ENST00000306024 PARM1Q6UWI2 310 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 ANGPTL8Q6UXH0 198 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 OR13C4Q8NGS5 318 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 CLHC1Q8NHS4 586 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 PCNPQ8WW12 178 aaKnown RBP10.52□□□□□ -0.73
LSM3-201ENST00000306024 ST6GAL2Q96JF0 529 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 ASB8Q9H765 288 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 KCTD3Q9Y597 815 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 MYOFQ9NZM1 2061 aa10.52□□□□□ -0.73
LSM3-201ENST00000306024 NUPL2O15504 423 aaKnown RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 CDK14O94921 469 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 EPOP01588 193 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 CD72P21854 359 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 HERVK_113P63132 956 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 C19orf57Q0VDD7 668 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 DBPQ10586 325 aaPredicted RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 GALEQ14376 348 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 AAK1Q2M2I8 961 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 SOWAHCQ53LP3 525 aaPredicted RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 ZNF678Q5SXM1 525 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 FAM151BQ6UXP7 276 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 PGBD5Q8N414 524 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 TPD52L3Q96J77 140 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 ACOX2Q99424 681 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 ERVK-6Q9BXR3 956 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 HDHD2Q9H0R4 259 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 ZNF556Q9HAH1 456 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 MALT1Q9UDY8 824 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 VPS9D1Q9Y2B5 631 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 DNMT3AQ9Y6K1 912 aaPredicted RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 A0A1W2PQ09 198 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 FAM234BA2RU67 622 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 CLDN24A6NM45 220 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 WBP4O75554 376 aaKnown RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 PRKAR1AP10644 381 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 AP2S1P53680 142 aaPredicted RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 SH3BP2P78314 561 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 PTPRCAPQ14761 206 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 WSCD2Q2TBF2 565 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 LCN1P1Q5VSP4 162 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 ZNF549Q6P9A3 640 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 RANBP10Q6VN20 620 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 GDPD4Q6W3E5 623 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 EIF3MQ7L2H7 374 aaKnown RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.51□□□□□ -0.73
LSM3-201ENST00000306024 NLGN4XQ8N0W4 816 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 OR4L1Q8NH43 312 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 ARRDC2Q8TBH0 407 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 NSUN5Q96P11 429 aaKnown RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 UQCC2Q9BRT2 126 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 SDR39U1Q9NRG7 319 aaPredicted RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 TMPRSS11EQ9UL52 423 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 POLR3HQ9Y535 204 aaPredicted RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 PPP6CO00743 305 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms