RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 OPN1SWP03999 348 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 ETFAP13804 333 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 TNFRSF1BP20333 461 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 TPP2P29144 1249 aaPredicted RBP10.9□□□□□ -0.66
SCG2-201ENST00000305409 CYBRD1Q53TN4 286 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 CCNYL2Q5T2Q4 361 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 ADGRF3Q8IZF5 1079 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 TNIP2Q8NFZ5 429 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 SETD7Q8WTS6 366 aaKnown RBP10.9□□□□□ -0.66
SCG2-201ENST00000305409 ITFG2Q969R8 447 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 PPCDCQ96CD2 204 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 GABRG3Q99928 467 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 GPATCH2Q9NW75 528 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 SMPD3Q9NY59 655 aaPredicted RBP10.9□□□□□ -0.66
SCG2-201ENST00000305409 SPHK1Q9NYA1 384 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 CD207Q9UJ71 328 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 ABCG2Q9UNQ0 655 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 MAP4K5Q9Y4K4 846 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 SNX8Q9Y5X2 465 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 HEATR5BQ9P2D3 2071 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 COL6A3P12111 3177 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 G3V2T6 193 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 PRMT3O60678 531 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 E2F6O75461 281 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 PRKRAO75569 313 aaKnown RBP10.9□□□□□ -0.66
SCG2-201ENST00000305409 FKBP9O95302 570 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 FURINP09958 794 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 ACADMP11310 421 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 NDUFV2P19404 249 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 SOAT1P35610 550 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 ARSFP54793 590 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 VMACQ2NL98 169 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 DPY19L1Q2PZI1 675 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 NADK2Q4G0N4 442 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 SLC30A9Q6PML9 568 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 FKBP9P1Q75LS8 142 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 MTSS1LQ765P7 747 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 KRT78Q8N1N4 520 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 METTL4Q8N3J2 472 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 DHRSXQ8N5I4 330 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 MFSD2AQ8NA29 543 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 SMRP1Q8NCR6 262 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 OR52E1Q8NGJ3 308 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.9□□□□□ -0.66
SCG2-201ENST00000305409 HMGB4Q8WW32 186 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 SMPDL3AQ92484 453 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 COQ8BQ96D53 544 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 PYURFQ96I23 114 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 MSLNLQ96KJ4 702 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 HAUS8Q9BT25 410 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 ANKRD60Q9BZ19 345 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 SLC6A16Q9GZN6 736 aa10.9□□□□□ -0.66
SCG2-201ENST00000305409 NDRG2Q9UN36 371 aaKnown RBP10.9□□□□□ -0.66
SCG2-201ENST00000305409 C1orf226A1L170 272 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 KLHL33A6NCF5 533 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 CCDC160A6NGH7 325 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 MYO1GB0I1T2 1018 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 H0YJX3 145 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 CACNB4O00305 520 aaPredicted RBP10.89□□□□□ -0.67
SCG2-201ENST00000305409 B4GAT1O43505 415 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 POLR2IP36954 125 aaKnown RBP10.89□□□□□ -0.67
SCG2-201ENST00000305409 CCR8P51685 355 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 RPS26P62854 115 aaKnown RBP10.89□□□□□ -0.67
SCG2-201ENST00000305409 IL1RL1Q01638 556 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 ZNF33BQ06732 778 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 SLC36A3Q495N2 470 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 GALNT18Q6P9A2 607 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 DGLUCYQ7Z3D6 616 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 SLC9B2Q86UD5 537 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 ZDHHC13Q8IUH4 622 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 TMEM145Q8NBT3 493 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 VPS37AQ8NEZ2 397 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 ZFP90Q8TF47 636 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 OR1E3Q8WZA6 343 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 TMIGD2Q96BF3 282 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 FCRL4Q96PJ5 515 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 AIF1LQ9BQI0 150 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 EHD1Q9H4M9 534 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 KLHL31Q9H511 634 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 SYNPO2LQ9H987 977 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 KCNK12Q9HB15 430 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 EXD2Q9NVH0 621 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 TBC1D29Q9UFV1 150 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 SLC17A4Q9Y2C5 497 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 TCRBV21S2A2A0A5A6 115 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 GLOD5A6NK44 160 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 GPX2P18283 190 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 PTX3P26022 381 aaPredicted RBP10.89□□□□□ -0.67
SCG2-201ENST00000305409 CCR3P51677 355 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 GRSF1Q12849 480 aaKnown RBP eCLIP10.89□□□□□ -0.67
SCG2-201ENST00000305409 RGNQ15493 299 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 ZNF542PQ5EBM4 170 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 FAM71E1Q6IPT2 247 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 ZDHHC21Q8IVQ6 265 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 SFTPA2Q8IWL1 248 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 FBXL6Q8N531 539 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 TSPAN14Q8NG11 270 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 OR4E2Q8NGC2 313 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 DNAJB8Q8NHS0 232 aa10.89□□□□□ -0.67
SCG2-201ENST00000305409 SLC35A5Q9BS91 424 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms