RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ABRQ12979 859 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 TUSC3Q13454 348 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 ZMAT1Q5H9K5 638 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 ATXN7L2Q5T6C5 722 aaPredicted RBP12.58□□□□□ -0.39
TRIM35-201ENST00000305364 CHPFQ8IZ52 775 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 Q8N402 240 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 LINC01465Q8N7H1 131 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 BEND7Q8N7W2 519 aaPredicted RBP12.58□□□□□ -0.39
TRIM35-201ENST00000305364 SOCS4Q8WXH5 440 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 APIPQ96GX9 242 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 SLC29A3Q9BZD2 475 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 TRPS1Q9UHF7 1281 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 PRKAB1Q9Y478 270 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 AOC2O75106 756 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 WBP4O75554 376 aaKnown RBP12.58□□□□□ -0.4
TRIM35-201ENST00000305364 CNR2P34972 360 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 FEN1P39748 380 aaKnown RBP12.58□□□□□ -0.4
TRIM35-201ENST00000305364 ALDH9A1P49189 494 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 PTCHD3Q3KNS1 767 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 CTSL3PQ5NE16 218 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 NADSYN1Q6IA69 706 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 OR5AK3PQ8NH89 298 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 ZNF431Q8TF32 576 aaPredicted RBP12.58□□□□□ -0.4
TRIM35-201ENST00000305364 NAALAD2Q9Y3Q0 740 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 RPL36Q9Y3U8 105 aaKnown RBP12.58□□□□□ -0.4
TRIM35-201ENST00000305364 A0A0G2JLL6 359 aaPredicted RBP12.58□□□□□ -0.4
TRIM35-201ENST00000305364 GLYATL1P3A0A0U1RQE8 302 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 INMT-MINDY4F8WBC2 141 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 PRRG1O14668 218 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 DSCR3O14972 297 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 NAT1P18440 290 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 CD52P31358 61 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 ATP5C1P36542 298 aaKnown RBP12.58□□□□□ -0.4
TRIM35-201ENST00000305364 SCARB2Q14108 478 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 TATDN3Q17R31 274 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 USP45Q70EL2 814 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 PRRT2Q7Z6L0 340 aaPredicted RBP12.58□□□□□ -0.4
TRIM35-201ENST00000305364 TCEANCQ8N8B7 351 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 NACC2Q96BF6 587 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 BOCQ9BWV1 1114 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 ACPTQ9BZG2 426 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 KCTD5Q9NXV2 234 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 KLK4Q9Y5K2 254 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 SESN1Q9Y6P5 492 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 ANKDD1BA6NHY2 528 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 TPST2O60704 377 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 UGT2B17O75795 530 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 NUDT7P0C024 238 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 SDC1P18827 310 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 PGFP49763 221 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 ZNF140P52738 457 aaPredicted RBP12.58□□□□□ -0.4
TRIM35-201ENST00000305364 EIF4HQ15056 248 aaKnown RBP12.58□□□□□ -0.4
TRIM35-201ENST00000305364 ZNF767PQ75MW2 155 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 NFKBIDQ8NI38 313 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 CMTM7Q96FZ5 175 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 TMEM80Q96HE8 168 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 MAPKAP1Q9BPZ7 522 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 MND1Q9BWT6 205 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 KLHL1Q9NR64 748 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 MUTYHQ9UIF7 546 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 PCDHB7Q9Y5E2 793 aa12.58□□□□□ -0.4
TRIM35-201ENST00000305364 MYO10Q9HD67 2058 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 SSNA1O43805 119 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 CLCN4P51793 760 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 SLC16A1P53985 500 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 FAPQ12884 760 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 GBX1Q14549 363 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 SPERTQ8NA61 448 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 FAM46DQ8NEK8 389 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 POF1BQ8WVV4 589 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 POLR2J3Q9H1A7 115 aaKnown RBP12.57□□□□□ -0.4
TRIM35-201ENST00000305364 PPIL3Q9H2H8 161 aaKnown RBP12.57□□□□□ -0.4
TRIM35-201ENST00000305364 MTIF3Q9H2K0 278 aaKnown RBP12.57□□□□□ -0.4
TRIM35-201ENST00000305364 SGK2Q9HBY8 427 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 FBXL12Q9NXK8 326 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 VPS29Q9UBQ0 182 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 CLCA2Q9UQC9 943 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 RUVBL1Q9Y265 456 aaKnown RBP12.57□□□□□ -0.4
TRIM35-201ENST00000305364 RPS5P46782 204 aaKnown RBP12.57□□□□□ -0.4
TRIM35-201ENST00000305364 UAP1L1Q3KQV9 507 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 DCST1Q5T197 706 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 CBLL1Q75N03 491 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 SERPINA11Q86U17 422 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 RNF130Q86XS8 419 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 PHC2Q8IXK0 858 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 ATP6V1C2Q8NEY4 427 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 PSKH2Q96QS6 385 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 C11orf54Q9H0W9 315 aaPredicted RBP12.57□□□□□ -0.4
TRIM35-201ENST00000305364 CSNK1G1Q9HCP0 422 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 PTGFRNQ9P2B2 879 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 CLEC4AQ9UMR7 237 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 FCF1Q9Y324 198 aaKnown RBP12.57□□□□□ -0.4
TRIM35-201ENST00000305364 DNAJC25-GNG10A0A024R161 153 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 SMLR1H3BR10 107 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 WWP2O00308 870 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 CD6P30203 668 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 RPS19P39019 145 aaKnown RBP12.57□□□□□ -0.4
TRIM35-201ENST00000305364 NKX3-2P78367 333 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 CSTF1Q05048 431 aaKnown RBP12.57□□□□□ -0.4
TRIM35-201ENST00000305364 CNTN1Q12860 1018 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms