RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CYP27C1Q4G0S4 372 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 ABCA11PQ4W5N1 156 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 REEP3Q6NUK4 255 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 SNX29P2Q8IUI4 249 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 SPATA9Q9BWV2 254 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 DPAGT1Q9H3H5 408 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 Q9N2J8 555 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 INSL6Q9Y581 213 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 LEFTY2O00292 366 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 ARL6IP5O75915 188 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 RLN2P04090 185 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 SLC6A9P48067 706 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 CD47Q08722 323 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 KCNC3Q14003 757 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 TCEANCQ8N8B7 351 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 MOCOSQ96EN8 888 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 MUS81Q96NY9 551 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 PSKH2Q96QS6 385 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 FAM53CQ9NYF3 392 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 SLC35F4A4IF30 521 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 CCDC85CA6NKD9 419 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 BEST1O76090 585 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 SLC10A2Q12908 348 aaPredicted RBP13.48□□□□□ -0.25
PRKCB-201ENST00000303531 PTGR1Q14914 329 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 PON3Q15166 354 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 RAB8BQ92930 207 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 IMP4Q96G21 291 aaKnown RBP13.48□□□□□ -0.25
PRKCB-201ENST00000303531 TTYH2Q9BSA4 534 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 SERINC1Q9NRX5 453 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 GNG8Q9UK08 70 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 CDC14AQ9UNH5 594 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 CMAHPQ9Y471 501 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF670-ZNF695F2Z2N8 137 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 INPPL1O15357 1258 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 SNAP29O95721 258 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 FPGSQ05932 587 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 CHAF1BQ13112 559 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 SCGB2B2Q4G0G5 96 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 SLC36A4Q6YBV0 504 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 VRTNQ9H8Y1 702 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 MS4A12Q9NXJ0 267 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 ABI3Q9P2A4 366 aa13.48□□□□□ -0.25
PRKCB-201ENST00000303531 HSD11B1P28845 292 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 UPP1Q16831 310 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 TSTD1Q8NFU3 115 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 ISOC1Q96CN7 298 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 SLC2A13Q96QE2 648 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 CYTH4Q9UIA0 394 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 GLOD5A6NK44 160 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 APLP1P51693 650 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 CDKL1Q00532 357 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 TSC22D1Q15714 1073 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF829Q3KNS6 432 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-201ENST00000303531 PLEKHS1Q5SXH7 462 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 KRTCAP2Q8N6L1 136 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 YES1P07947 543 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 HLA-EP13747 358 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 CCSAPQ6IQ19 270 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-201ENST00000303531 SLC29A4Q7RTT9 530 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 OR8J3Q8NGG0 315 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 EPYCQ99645 322 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 WACQ9BTA9 647 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 REEP4Q9H6H4 257 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 MEAF6Q9HAF1 191 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 TRPV4Q9HBA0 871 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 AKAP12Q02952 1782 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 SIGLEC1Q9BZZ2 1709 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 GLDCP23378 1020 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 GATMP50440 423 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 RPP38P78345 283 aaKnown RBP13.47□□□□□ -0.25
PRKCB-201ENST00000303531 TMEM115Q12893 351 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-201ENST00000303531 PUS10Q3MIT2 529 aaKnown RBP13.47□□□□□ -0.25
PRKCB-201ENST00000303531 NOXRED1Q6NXP6 359 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 Q6ZVL8 140 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 TRIM74Q86UV6 250 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 CEP97Q8IW35 865 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 PNLDC1Q8NA58 520 aaKnown RBP13.47□□□□□ -0.25
PRKCB-201ENST00000303531 MKLN1Q9UL63 735 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 KHNYNO15037 678 aaKnown RBP13.47□□□□□ -0.25
PRKCB-201ENST00000303531 SNAI1O95863 264 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-201ENST00000303531 PTNP21246 168 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 TSPEARQ8WU66 669 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 KANTRA0A1W2PQU2 76 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 H3BSH0 61 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 COCHO43405 550 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 SLC35E2BP0CK96 405 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF776Q68DI1 518 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-201ENST00000303531 SMYD5Q6GMV2 418 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 THEM6Q8WUY1 208 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 C17orf62Q9BQA9 187 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 KCNH6Q9H252 994 aa13.47□□□□□ -0.25
PRKCB-201ENST00000303531 PGGT1BP53609 377 aa13.46□□□□□ -0.25
PRKCB-201ENST00000303531 INO80EQ8NBZ0 244 aaPredicted RBP13.46□□□□□ -0.25
PRKCB-201ENST00000303531 C7orf57Q8NEG2 295 aa13.46□□□□□ -0.25
PRKCB-201ENST00000303531 HDAC2Q92769 488 aaKnown RBP13.46□□□□□ -0.25
PRKCB-201ENST00000303531 OR51I1Q9H343 314 aa13.46□□□□□ -0.25
PRKCB-201ENST00000303531 MGAT4BQ9UQ53 548 aa13.46□□□□□ -0.25
PRKCB-201ENST00000303531 PTGDR2Q9Y5Y4 395 aa13.46□□□□□ -0.25
PRKCB-201ENST00000303531 PDE4DIPQ5VU43 2346 aa13.46□□□□□ -0.25
PRKCB-201ENST00000303531 A0A1B0GVT2 93 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms