RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 ADAMTS18Q8TE60 1221 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 AGAP11Q8TF27 550 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 GATA6Q92908 595 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 GAL3ST3Q96A11 431 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 FKBP10Q96AY3 582 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 SMIM10Q96HG1 83 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 FAR2Q96K12 515 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 QRFPRQ96P65 431 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 ZNF317Q96PQ6 595 aaPredicted RBP8.43□□□□□ -1.06
VPREB1-201ENST00000302273 KCNC2Q96PR1 638 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 TBCDQ9BTW9 1192 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 REXO4Q9GZR2 422 aaKnown RBP8.43□□□□□ -1.06
VPREB1-201ENST00000302273 ILKAPQ9H0C8 392 aaPredicted RBP8.43□□□□□ -1.06
VPREB1-201ENST00000302273 KLHL25Q9H0H3 589 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 SLC26A1Q9H2B4 701 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 CCDC86Q9H6F5 360 aaKnown RBP8.43□□□□□ -1.06
VPREB1-201ENST00000302273 WDR54Q9H977 334 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 MID1IP1Q9NPA3 183 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 PRDM9Q9NQV7 894 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 CUTCQ9NTM9 273 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 INTS9Q9NV88 658 aaKnown RBP8.43□□□□□ -1.06
VPREB1-201ENST00000302273 IRAK4Q9NWZ3 460 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 SIRT5Q9NXA8 310 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 MS4A12Q9NXJ0 267 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 KCND3Q9UK17 655 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 NXT1Q9UKK6 140 aaKnown RBP8.43□□□□□ -1.06
VPREB1-201ENST00000302273 SH2B3Q9UQQ2 575 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 KLHL20Q9Y2M5 609 aa8.43□□□□□ -1.06
VPREB1-201ENST00000302273 WBP11Q9Y2W2 641 aaKnown RBP8.43□□□□□ -1.06
VPREB1-201ENST00000302273 UNC13CQ8NB66 2214 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 FEZF1A0PJY2 475 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 RRP8O43159 456 aaKnown RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 NDUFS4O43181 175 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 PRAMEF10O60809 474 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 SCELO95171 688 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 CAPNS1P04632 268 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 EIF2S1P05198 315 aaKnown RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 NEFHP12036 1026 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 ALOX12P18054 663 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 CD22P20273 847 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 ITGAXP20702 1163 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 ARL1P40616 181 aaPredicted RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 ETV5P41161 510 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 WDR4P57081 412 aaKnown RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 CORO7P57737 925 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 ABCE1P61221 599 aaKnown RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 STX3Q13277 289 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 DSG2Q14126 1118 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 ZRSR2Q15696 482 aaKnown RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 RBBP7Q16576 425 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 CPSF6Q16630 551 aaKnown RBP eCLIP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 ARL13AQ5H913 290 aaPredicted RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 KHDRBS2Q5VWX1 349 aaKnown RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 LETMD1Q6P1Q0 360 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 TRIM40Q6P9F5 258 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 C6orf89Q6UWU4 347 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 MYLK4Q86YV6 388 aaPredicted RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 DSELQ8IZU8 1212 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 HUS1BQ8NHY5 278 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 KIAA1143Q96AT1 154 aaPredicted RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 CLIP3Q96DZ5 547 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 CHMP6Q96FZ7 201 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 CNTNAP3BQ96NU0 1288 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 NSUN5Q96P11 429 aaKnown RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 GBP5Q96PP8 586 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 OR1F2PQ96R84 312 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 CTRCQ99895 268 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 TMEM121BQ9BXQ6 578 aaPredicted RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 MS4A8Q9BY19 250 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 CNTNAP3Q9BZ76 1288 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 TGIF2Q9GZN2 237 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 SPRTNQ9H040 489 aaPredicted RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 MANSC1Q9H8J5 431 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 ANKHQ9HCJ1 492 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 APMAPQ9HDC9 416 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 LHX9Q9NQ69 397 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 ADAM29Q9UKF5 820 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 RUVBL1Q9Y265 456 aaKnown RBP8.42□□□□□ -1.06
VPREB1-201ENST00000302273 PADI2Q9Y2J8 665 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 SSUH2Q9Y2M2 353 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 RNF11Q9Y3C5 154 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 PCDHGA6Q9Y5G7 932 aa8.42□□□□□ -1.06
VPREB1-201ENST00000302273 ATRXP46100 2492 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 IGLV3-12A0A075B6K2 115 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 LRRC14BA6NHZ5 514 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 C9J4A7 227 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 UBFD1O14562 309 aaKnown RBP8.41□□□□□ -1.06
VPREB1-201ENST00000302273 AZIN1O14977 448 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 HCRTR1O43613 425 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 GALR3O60755 368 aaPredicted RBP8.41□□□□□ -1.06
VPREB1-201ENST00000302273 GUCY1B2O75343 617 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 CRCPO75575 148 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 KIAA0754O94854 1291 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 CAPN1P07384 714 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 ACPPP15309 386 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 PRPH2P23942 346 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 HMOX2P30519 316 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 SLC1A6P48664 564 aa8.41□□□□□ -1.06
VPREB1-201ENST00000302273 RPL14P50914 215 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms