RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 NUP98P52948 1817 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 FLRT2O43155 660 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 AMY2BP19961 511 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 FOXN2P32314 431 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 THBS3P49746 956 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF84P51523 738 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 SNRPD2P62316 118 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 PIGGQ5H8A4 983 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC43A3Q8NBI5 491 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 MKRN2Q9H000 416 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 MOXD2PA6NHM9 499 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ARPC5O15511 151 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 FGF10O15520 208 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 KERAO60938 352 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 PRPH2P23942 346 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TAF1CQ15572 869 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 AVPI1Q5T686 147 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 RCBTB1Q8NDN9 531 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC38A1Q9H2H9 487 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ATP13A3Q9H7F0 1226 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 PRDM9Q9NQV7 894 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 A8MX80 341 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 CYP2B6P20813 491 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 CRHR1P34998 444 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC10A1Q14973 349 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TXNRD3Q86VQ6 643 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 OR10G2Q8NGC3 310 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TRMOQ9BU70 441 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 LRRC42Q9Y546 428 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 KIAA1324LA8MWY0 1029 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC25A27O95847 323 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 SRPRAP08240 638 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ART1P52961 327 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 BCL2L1Q07817 233 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC39A12Q504Y0 691 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 FBXL16Q8N461 479 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF527Q8NB42 609 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 GJD4Q96KN9 370 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 A0A1B0GVI7 797 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 RPS10-NUDT3A0A1W2PQS6 291 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TRAFD1O14545 582 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 DIRAS3O95661 229 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 CTPS1P17812 591 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 RPS10P46783 165 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 FGFBP1Q14512 234 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 IFI44LQ53G44 452 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 GALNT10Q86SR1 603 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 NOXA1Q86UR1 476 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TMEM104Q8NE00 496 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TWIST2Q8WVJ9 160 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ZDHHC15Q96MV8 337 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 QRSL1Q9H0R6 528 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 SPATA31A1Q5TZJ5 1347 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 KIAA1549Q9HCM3 1950 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 RAC2P15153 192 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 GPX6P59796 221 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TMPRSS11BQ86T26 416 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ZSCAN4Q8NAM6 433 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TSPAN10Q9H1Z9 355 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 HIPK2Q9H2X6 1198 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ZDHHC6Q9H6R6 413 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 PAK1IP1Q9NWT1 392 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 PRAMEF2O60811 474 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 GADD45GO95257 159 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TAS2R31P59538 309 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TAS2R20P59543 309 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 RHDQ02161 417 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 NUDT9Q9BW91 350 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 MTIF3Q9H2K0 278 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 LOC102724200A0A096LPH7 203 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TCRBV9S1A1TA0A576 114 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 RFPL3O75679 317 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 RPP14O95059 124 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 MIPP30301 263 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF484Q5JVG2 852 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC22A10Q63ZE4 541 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 NXPE1Q8N323 547 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 KDM1BQ8NB78 822 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 OR1J4Q8NGS1 313 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ZDHHC1Q8WTX9 485 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 S100A7P31151 101 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC26A2P50443 739 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 METTL3Q86U44 580 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 OR4C15Q8NGM1 316 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF675Q8TD23 568 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 HPSE2Q8WWQ2 592 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 GEMIN6Q8WXD5 167 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 FERD3LQ96RJ6 166 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 OR51E2Q9H255 320 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 WDR55Q9H6Y2 383 aaPredicted RBP10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 ITM2CQ9NQX7 267 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SNX15Q9NRS6 342 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 PRSS44E7EML9 344 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 TLR4O00206 839 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 CYP1A2P05177 515 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SNRNP70P08621 437 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 CREB1P16220 341 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SEMA5AQ13591 1074 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 UPP1Q16831 310 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SMG8Q8ND04 991 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms