RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 DERAQ9Y315 318 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 CCDC85CA6NKD9 419 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 DUXAA6NLW8 204 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 E9PI62 339 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 K7EPK0 472 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 CELP19835 753 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 GLP1RP43220 463 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 GLUD2P49448 558 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 NDUFV1P49821 464 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 PCBP1Q15365 356 aaKnown RBP eCLIP14.41□□□□□ -0.1
SCN3B-201ENST00000299333 STK11Q15831 433 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 ARHGAP12Q8IWW6 846 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 FAM71E2Q8N5Q1 922 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 SCGB1C1Q8TD33 95 aa14.41□□□□□ -0.1
SCN3B-201ENST00000299333 MAP2P11137 1827 aaKnown RBP14.4□□□□□ -0.1
SCN3B-201ENST00000299333 OR6C6A6NF89 314 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 KIAA0513O60268 411 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF254O75437 659 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 WDPCPO95876 746 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 HERV-K104P61576 105 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 DCST2Q5T1A1 773 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 TMEM145Q8NBT3 493 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 RNF121Q9H920 327 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 AGLP35573 1532 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 HSBP1L1C9JCN9 74 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 DFNA5O60443 496 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 LCKP06239 509 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 GKN3PP0CG01 181 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 PTNP21246 168 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 TAS2R43P59537 309 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 PRAMEF19Q5SWL8 479 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 ETFRF1Q6IPR1 90 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 ANKRD54Q6NXT1 300 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 C1orf52Q8N6N3 182 aaKnown RBP14.4□□□□□ -0.1
SCN3B-201ENST00000299333 SMARCD2Q92925 531 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 MRPL15Q9P015 296 aaKnown RBP14.4□□□□□ -0.1
SCN3B-201ENST00000299333 IFT52Q9Y366 437 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 A0A1B0GVM2 712 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 OR6C74A6NCV1 312 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 FAM159BA6NKW6 160 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 NAT1P18440 290 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 MAPK3P27361 379 aaPredicted RBP14.4□□□□□ -0.1
SCN3B-201ENST00000299333 HOXC12P31275 282 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 HTR7P34969 479 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 CD47Q08722 323 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 C6orf141Q5SZD1 244 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 BEST3Q8N1M1 668 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 ABCG5Q9H222 651 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 ADARB2Q9NS39 739 aaKnown RBP14.4□□□□□ -0.1
SCN3B-201ENST00000299333 ACSL5Q9ULC5 683 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 SPATA31D1Q6ZQQ2 1576 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 H0YAE9 185 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 PCDH17O14917 1159 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 INPPL1O15357 1258 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 MRPL3P09001 348 aaKnown RBP14.4□□□□□ -0.1
SCN3B-201ENST00000299333 RABGGTBP53611 331 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 ALG10BQ5I7T1 473 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 SLC35F1Q5T1Q4 408 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 UBE2UQ5VVX9 321 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 MBLAC2Q68D91 279 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 CYP2S1Q96SQ9 504 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 PPP4R1LQ9P1A2 415 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 GIMAP2Q9UG22 337 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 TLR6Q9Y2C9 796 aa14.4□□□□□ -0.1
SCN3B-201ENST00000299333 A0A1W2PPK0 400 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 F8W036 122 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 RBBP9O75884 186 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 KLK1P06870 262 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 OR1D2P34982 312 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 BLOC1S1P78537 153 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 SEMG2Q02383 582 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 SLBPQ14493 270 aaKnown RBP eCLIP14.39□□□□□ -0.11
SCN3B-201ENST00000299333 C22orf42Q6IC83 251 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 CEACAM20Q6UY09 585 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 MBOAT1Q6ZNC8 495 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 HYLS1Q96M11 299 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 SEC61A2Q9H9S3 476 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 ACTR10Q9NZ32 417 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 COPS7AQ9UBW8 275 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 SPATA31C2B4DYI2 1134 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 CASC3O15234 703 aaKnown RBP14.39□□□□□ -0.11
SCN3B-201ENST00000299333 PRKAR1BP31321 381 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 SOX2P48431 317 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 NDST2P52849 883 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 CXCL9Q07325 125 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 FGFBP1Q14512 234 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 C21orf62-AS1Q17RA5 79 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 TSPAN33Q86UF1 283 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 PIM3Q86V86 326 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 LINC00471Q8N535 108 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 OR5T1Q8NG75 326 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 ZUFSPQ96AP4 578 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 IDI2Q9BXS1 227 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 HCN4Q9Y3Q4 1203 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 BMP8BP34820 402 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 COL9A3Q14050 684 aaPredicted RBP14.39□□□□□ -0.11
SCN3B-201ENST00000299333 HNRNPDQ14103 355 aaKnown RBP14.39□□□□□ -0.11
SCN3B-201ENST00000299333 CYP27C1Q4G0S4 372 aa14.39□□□□□ -0.11
SCN3B-201ENST00000299333 PSRC1Q6PGN9 363 aaPredicted RBP14.39□□□□□ -0.11
SCN3B-201ENST00000299333 BMP8AQ7Z5Y6 402 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms