RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 C1orf94Q6P1W5 598 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 RELL1Q8IUW5 271 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 SLC25A44Q96H78 314 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 TGM7Q96PF1 710 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 KLHL13Q9P2N7 655 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 UBE2J1Q9Y385 318 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 LRRC42Q9Y546 428 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 PCDHGA6Q9Y5G7 932 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 FTCDNL1E5RQL4 147 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 SLC7A4O43246 635 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 GRM5P41594 1212 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 BNIP3Q12983 259 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 NOXRED1Q6NXP6 359 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 LILRB2Q8N423 598 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 MOAP1Q96BY2 351 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 PGAP3Q96FM1 320 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 OSBPL7Q9BZF2 842 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 EPHA6Q9UF33 1036 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 CD84Q9UIB8 345 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 MAGED1Q9Y5V3 778 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 CD52P31358 61 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 FRKP42685 505 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ACTA2P62736 377 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ACTG2P63267 376 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 PIGGQ5H8A4 983 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 FAM46DQ8NEK8 389 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 MTFR1LQ9H019 292 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 CHRAC1Q9NRG0 131 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 MGAT4CQ9UBM8 478 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 POMPQ9Y244 141 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 RTTNQ86VV8 2226 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 C2orf72A6NCS6 295 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 TISP43B9A030 160 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 RHBDL3P58872 404 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 PPM1JQ5JR12 505 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 PHF19Q5T6S3 580 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 RBM23Q86U06 439 aaKnown RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 RPLP0P6Q8NHW5 317 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 FAM86C1Q9NVL1 165 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF446Q9NWS9 450 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 EEF1E1O43324 174 aaKnown RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 DGKGP49619 791 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 PRKXP51817 358 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ACTBP60709 375 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ACTG1P63261 375 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 RHDQ02161 417 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 RFTN1Q14699 578 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF674Q2M3X9 581 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 TBRG1Q3YBR2 411 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 FKBP1CQ5VVH2 108 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF420Q8TAQ5 688 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 WFIKKN2Q8TEU8 576 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 C2orf15Q8WU43 125 aaKnown RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 NSMAFQ92636 917 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ALG3Q92685 438 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 VRK1Q99986 396 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 URM1Q9BTM9 101 aaKnown RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 TFB2MQ9H5Q4 396 aaKnown RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 BIN3Q9NQY0 253 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 A0A0A6YYH2 397 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 A6NJ64 397 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 CASC3O15234 703 aaKnown RBP8.46□□□□□ -1.05
NIPBL-201ENST00000282516 LGR5O75473 907 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 RGS9O75916 674 aaPredicted RBP8.46□□□□□ -1.05
NIPBL-201ENST00000282516 PFKLP17858 780 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 CDKN2BP42772 138 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 CAP1Q01518 475 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 KLF1Q13351 362 aaPredicted RBP8.46□□□□□ -1.05
NIPBL-201ENST00000282516 KIAA0930Q6ICG6 404 aaPredicted RBP8.46□□□□□ -1.05
NIPBL-201ENST00000282516 Q8N402 240 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF283Q8N7M2 679 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 PLD5Q8N7P1 536 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 PSD4Q8NDX1 1056 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 TSTD1Q8NFU3 115 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 OR13C3Q8NGS6 347 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 NKD2Q969F2 451 aaPredicted RBP8.46□□□□□ -1.05
NIPBL-201ENST00000282516 ARL11Q969Q4 196 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 MTG2Q9H4K7 406 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 ERCC6L2Q5T890 1561 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 EME2A4GXA9 379 aaPredicted RBP8.46□□□□□ -1.05
NIPBL-201ENST00000282516 BLOC1S5-TXNDC5H3BN57 136 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 ACTL6BO94805 426 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 IL10RBQ08334 325 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 ST3GAL3Q11203 375 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 UGT8Q16880 541 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 C10orf62Q5T681 223 aaPredicted RBP8.46□□□□□ -1.05
NIPBL-201ENST00000282516 TSTD2Q5T7W7 516 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 TM9SF4Q92544 642 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 TMBIM1Q969X1 311 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF578Q96N58 590 aaPredicted RBP8.46□□□□□ -1.05
NIPBL-201ENST00000282516 SDCBP2Q9H190 292 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 RFPL1O75677 317 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 FAM155BO75949 473 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 FPR1P21462 350 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 EIF2B1Q14232 305 aaKnown RBP8.46□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF630Q2M218 657 aaPredicted RBP8.46□□□□□ -1.05
NIPBL-201ENST00000282516 RALGPS1Q5JS13 557 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 ARHGAP40Q5TG30 622 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 MEDAGQ5VYS4 303 aa8.46□□□□□ -1.05
NIPBL-201ENST00000282516 PXKQ7Z7A4 578 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms