RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 ZNF548Q8NEK5 533 aaPredicted RBP21.09■□□□□ 0.97
CCDC7-201ENST00000277657 OR2T12Q8NG77 320 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 FLVCR1-AS1Q8TAF5 88 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 PKP2Q99959 881 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 LHX9Q9NQ69 397 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 POT1Q9NUX5 634 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 SNX7Q9UNH6 387 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 INVSQ9Y283 1065 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 WBP11Q9Y2W2 641 aaKnown RBP21.09■□□□□ 0.97
CCDC7-201ENST00000277657 KIR2DS5A0A0G2JLQ3 304 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 A0A0G2JNG1 304 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 A0A1W2PR77 199 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 DHRS12A0PJE2 317 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 OR5K4A6NMS3 321 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 KIR2DS3K7RE56 304 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 RNASET2O00584 256 aaKnown RBP21.09■□□□□ 0.97
CCDC7-201ENST00000277657 NDUFS4O43181 175 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 CAPNS1P04632 268 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 GGT1P19440 569 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 PEX2P28328 305 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 AHRP35869 848 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 GZMMP51124 257 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 C2orf80Q0P641 193 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 LRRC74AQ0VAA2 488 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 KIR2DS5Q14953 304 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 ZNF385BQ569K4 471 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 CMPK2Q5EBM0 449 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 UBE3DQ7Z6J8 389 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 TRIM48Q8IWZ4 208 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 CLECL1Q8IZS7 167 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 TMEM102Q8N9M5 508 aaPredicted RBP21.09■□□□□ 0.97
CCDC7-201ENST00000277657 VPS37AQ8NEZ2 397 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 PATE1Q8WXA2 126 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 RGMAQ96B86 450 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 PHF12Q96QT6 1004 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 ZNF184Q99676 751 aaPredicted RBP21.09■□□□□ 0.97
CCDC7-201ENST00000277657 VCX3BQ9H321 246 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 RPF2Q9H7B2 306 aaKnown RBP21.09■□□□□ 0.97
CCDC7-201ENST00000277657 CPNE7Q9UBL6 633 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 AP1M2Q9Y6Q5 423 aa21.09■□□□□ 0.97
CCDC7-201ENST00000277657 LRIT2A6NDA9 550 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 CAPN5O15484 640 aaPredicted RBP21.08■□□□□ 0.97
CCDC7-201ENST00000277657 PEX1O43933 1283 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 VIPP01282 170 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 WNT1P04628 370 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 MC1RQ01726 317 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 TAF11Q15544 211 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 CCNYL2Q5T2Q4 361 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 GLYATQ6IB77 296 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 ADGRG5Q8IZF4 528 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 DEFB119Q8N690 84 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 TNIP2Q8NFZ5 429 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 QRFPRQ96P65 431 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 CENPKQ9BS16 269 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 EFHD1Q9BUP0 239 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 ATAD3AQ9NVI7 634 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 SH3BP4Q9P0V3 963 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 ADAM29Q9UKF5 820 aa21.08■□□□□ 0.97
CCDC7-201ENST00000277657 DNAH14Q0VDD8 3507 aa21.08■□□□□ 0.96
CCDC7-201ENST00000277657 RTCAO00442 366 aaKnown RBP21.07■□□□□ 0.96
CCDC7-201ENST00000277657 GPIP06744 558 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 ZCCHC18P0CG32 403 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 CTSEP14091 401 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 PLCL1Q15111 1095 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 TMEM35AQ53FP2 167 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 TAF8Q7Z7C8 310 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 IQCHQ86VS3 1027 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 PAQR7Q86WK9 346 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 TBC1D19Q8N5T2 526 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 KLHL4Q9C0H6 718 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 AICDAQ9GZX7 198 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 GMEB1Q9Y692 573 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 FAM220BPB1ANY3 271 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 IL3P08700 152 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 HOXB3P14651 431 aaPredicted RBP21.07■□□□□ 0.96
CCDC7-201ENST00000277657 CD38P28907 300 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 SOX11P35716 441 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 ADPRMQ3LIE5 342 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 IZUMO2Q6UXV1 221 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 GPR155Q7Z3F1 870 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 NAGSQ8N159 534 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 C10orf111Q8N326 155 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 PPCDCQ96CD2 204 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 ZNF570Q96NI8 536 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 OR2A14Q96R47 310 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 LRRC61Q9BV99 259 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 DDX31Q9H8H2 851 aaKnown RBP21.07■□□□□ 0.96
CCDC7-201ENST00000277657 GORASP2Q9H8Y8 452 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 APOBEC3BQ9UH17 382 aaKnown RBP21.07■□□□□ 0.96
CCDC7-201ENST00000277657 PCDHGA4Q9Y5G9 962 aa21.07■□□□□ 0.96
CCDC7-201ENST00000277657 ELOVL7A1L3X0 281 aa21.06■□□□□ 0.96
CCDC7-201ENST00000277657 FAM221BA6H8Z2 402 aa21.06■□□□□ 0.96
CCDC7-201ENST00000277657 STK25O00506 426 aa21.06■□□□□ 0.96
CCDC7-201ENST00000277657 MAP3K13O43283 966 aa21.06■□□□□ 0.96
CCDC7-201ENST00000277657 CPSF4O95639 269 aaKnown RBP21.06■□□□□ 0.96
CCDC7-201ENST00000277657 UMPSP11172 480 aa21.06■□□□□ 0.96
CCDC7-201ENST00000277657 ACADSP16219 412 aa21.06■□□□□ 0.96
CCDC7-201ENST00000277657 JUNDP17535 347 aa21.06■□□□□ 0.96
CCDC7-201ENST00000277657 PSMA4P25789 261 aaKnown RBP21.06■□□□□ 0.96
CCDC7-201ENST00000277657 RACK1P63244 317 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms