RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 NARSO43776 548 aaKnown RBP9.17□□□□□ -0.94
TRIM55-201ENST00000276573 CCNDBP1O95273 360 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 ASGR2P07307 311 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 LINGO3P0C6S8 592 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 FAM58BPP0C7Q3 252 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 HOXB6P17509 224 aaKnown RBP9.17□□□□□ -0.94
TRIM55-201ENST00000276573 CD72P21854 359 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 HNRNPA2B1P22626 353 aaKnown RBP9.17□□□□□ -0.94
TRIM55-201ENST00000276573 BSGP35613 385 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 CYP4F2P78329 520 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 MYBPC1Q00872 1141 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TFF2Q03403 129 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 ADRM1Q16186 407 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 PRSS53Q2L4Q9 553 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 MPEG1Q2M385 716 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TMEM31Q5JXX7 168 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TPRG1LQ5T0D9 272 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TBPL2Q6SJ96 375 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 ABRAXAS1Q6UWZ7 409 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 WASH2PQ6VEQ5 465 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 IKBIPQ70UQ0 350 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 CARM1Q86X55 608 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 ST13P4Q8IZP2 240 aaPredicted RBP9.17□□□□□ -0.94
TRIM55-201ENST00000276573 EID3Q8N140 333 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 OR4A15Q8NGL6 344 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TM4SF18Q96CE8 201 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 SPATA9Q9BWV2 254 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 ZNF717Q9BY31 904 aaPredicted RBP9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TMEM184CQ9NVA4 438 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 DNAJB9Q9UBS3 223 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 ZNF282Q9UDV7 671 aaPredicted RBP9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TBC1D29Q9UFV1 150 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 EBF1Q9UH73 591 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 WBP11Q9Y2W2 641 aaKnown RBP9.17□□□□□ -0.94
TRIM55-201ENST00000276573 COLEC10Q9Y6Z7 277 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 CDH23Q9H251 3354 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TRBC2A0A5B9 178 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 H0Y8X5 98 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 PLOD2O00469 737 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 EI24O14681 340 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 ABCB1P08183 1280 aaPredicted RBP9.17□□□□□ -0.94
TRIM55-201ENST00000276573 IL3P08700 152 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 ZNF23P17027 643 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 KDELR2P33947 212 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 HBA1P69905 142 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 MERTKQ12866 999 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 RGNQ15493 299 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 IYDQ6PHW0 289 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 PAGE2Q7Z2X7 111 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 CLEC4FQ8N1N0 589 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 SYNPOQ8N3V7 929 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 PNPT1Q8TCS8 783 aaKnown RBP9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TMBIM1Q969X1 311 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TSACCQ96A04 125 aaPredicted RBP9.17□□□□□ -0.94
TRIM55-201ENST00000276573 RGMAQ96B86 450 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 QRFPRQ96P65 431 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 ANKRD60Q9BZ19 345 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 CHST8Q9H2A9 424 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 CXorf56Q9H5V9 222 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 KIR3DX1Q9H7L2 352 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 UTS2RQ9UKP6 389 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 CORO2BQ9UQ03 480 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 HS3ST3A1Q9Y663 406 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 F5P12259 2224 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 A0A1W2PRB8 838 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 C10orf142B7Z368 130 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 RTCAO00442 366 aaKnown RBP9.16□□□□□ -0.94
TRIM55-201ENST00000276573 CAPN5O15484 640 aaPredicted RBP9.16□□□□□ -0.94
TRIM55-201ENST00000276573 KDM1AO60341 852 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 TBX19O60806 448 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 CLEC3AO75596 197 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 TNFAIP8O95379 198 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 EML2O95834 649 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 C6orf47O95873 294 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 CST1P01037 141 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 NTRK1P04629 796 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 AK4P27144 223 aaPredicted RBP9.16□□□□□ -0.94
TRIM55-201ENST00000276573 HTR1BP28222 390 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 AKT2P31751 481 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 RPS9P46781 194 aaKnown RBP9.16□□□□□ -0.94
TRIM55-201ENST00000276573 YPEL5P62699 121 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 ABATP80404 500 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 VEZF1Q14119 521 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 C16orf72Q14CZ0 275 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 SLC36A3Q495N2 470 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 TMEM214Q6NUQ4 689 aaKnown RBP9.16□□□□□ -0.94
TRIM55-201ENST00000276573 RD3Q7Z3Z2 195 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 ADCK2Q7Z695 626 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 UBE3DQ7Z6J8 389 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 PLD3Q8IV08 490 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 ADGRF3Q8IZF5 1079 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 MMP21Q8N119 569 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 NAGSQ8N159 534 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 MAGEE2Q8TD90 523 aaPredicted RBP9.16□□□□□ -0.94
TRIM55-201ENST00000276573 CREB3L4Q8TEY5 395 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 CIDECQ96AQ7 238 aaPredicted RBP9.16□□□□□ -0.94
TRIM55-201ENST00000276573 PDXPQ96GD0 296 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 MSANTD3Q96H12 275 aa9.16□□□□□ -0.94
TRIM55-201ENST00000276573 DPH2Q9BQC3 489 aaPredicted RBP9.16□□□□□ -0.94
TRIM55-201ENST00000276573 SLC6A16Q9GZN6 736 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms