RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 H7C4K7 107 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 POU1F1P28069 291 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 HNMTP50135 292 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 RAE1P78406 368 aaKnown RBP26.43■■□□□ 1.82
CBX4-201ENST00000269397 NDUFA5Q16718 116 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 DCAF4L2Q8NA75 395 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 OR6F1Q8NGZ6 308 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 VANGL1Q8TAA9 524 aaPredicted RBP26.43■■□□□ 1.82
CBX4-201ENST00000269397 TP53INP1Q96A56 240 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 TMEM161AQ9NX61 479 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 ZNF221Q9UK13 617 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 NINQ8N4C6 2090 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 ARHGAP33O14559 1287 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 LHCGRP22888 699 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 AZGP1P25311 298 aaKnown RBP26.42■■□□□ 1.82
CBX4-201ENST00000269397 PCGF2P35227 344 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 PTSQ03393 145 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 SMARCB1Q12824 385 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 OR4C15Q8NGM1 316 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 WDR20Q8TBZ3 569 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 CNPPD1Q9BV87 410 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 TMPRSS11EQ9UL52 423 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 BOLA1Q9Y3E2 137 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 GNG14A0A1W2PPG7 69 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 AGAP14A8MT82 685 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 TNFSF8P32971 234 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 FKBP1BP68106 108 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 IRF3Q14653 427 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 PTGES3Q15185 160 aaKnown RBP26.42■■□□□ 1.82
CBX4-201ENST00000269397 FAM217AQ8IXS0 508 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 WDR36Q8NI36 951 aaKnown RBP26.42■■□□□ 1.82
CBX4-201ENST00000269397 NFKBIDQ8NI38 313 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 SLC30A2Q9BRI3 323 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 WBP11Q9Y2W2 641 aaKnown RBP26.42■■□□□ 1.82
CBX4-201ENST00000269397 PNMA8CA0A1B0GUJ8 204 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 FAM227AF5H4B4 570 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 PRMT3O60678 531 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 DPM1O60762 260 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 GPX5O75715 221 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 KRT75O95678 551 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 SLC10A3P09131 477 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 ANXA8P13928 327 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 TGM4P49221 684 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 STK19P49842 368 aaPredicted RBP26.42■■□□□ 1.82
CBX4-201ENST00000269397 CDKL4Q5MAI5 379 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 CCSAPQ6IQ19 270 aaPredicted RBP26.42■■□□□ 1.82
CBX4-201ENST00000269397 RETSATQ6NUM9 610 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 ZNF783Q6ZMS7 281 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 HS6ST3Q8IZP7 471 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 DENND6BQ8NEG7 585 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 PCDHB7Q9Y5E2 793 aa26.42■■□□□ 1.82
CBX4-201ENST00000269397 PDE4DIPQ5VU43 2346 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.41■■□□□ 1.82
CBX4-201ENST00000269397 ZNF821O75541 412 aaPredicted RBP26.41■■□□□ 1.82
CBX4-201ENST00000269397 CYP2A7P20853 494 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 HTR3AP46098 478 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 SSX1Q16384 188 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 ZNF385BQ569K4 471 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 VASH1Q7L8A9 365 aaPredicted RBP26.41■■□□□ 1.82
CBX4-201ENST00000269397 ATCAYQ86WG3 371 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 DEPDC4Q8N2C3 294 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 FAM129BQ96TA1 746 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 C2orf49Q9BVC5 232 aaPredicted RBP26.41■■□□□ 1.82
CBX4-201ENST00000269397 KLK4Q9Y5K2 254 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 MN1Q10571 1320 aaPredicted RBP26.41■■□□□ 1.82
CBX4-201ENST00000269397 CCDC88CQ9P219 2028 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 NPIPB8E9PQR5 432 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 GALTP07902 379 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 FLT3LGP49771 235 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 RACK1P63244 317 aaKnown RBP26.41■■□□□ 1.82
CBX4-201ENST00000269397 IFI44LQ53G44 452 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 OR5AK3PQ8NH89 298 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 ZNF556Q9HAH1 456 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 SGK2Q9HBY8 427 aa26.41■■□□□ 1.82
CBX4-201ENST00000269397 MGAT4DA6NG13 374 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 IDSP22304 550 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 SOX3P41225 446 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 TUFMP49411 452 aaKnown RBP26.4■■□□□ 1.82
CBX4-201ENST00000269397 OLR1P78380 273 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 KRR1Q13601 381 aaKnown RBP26.4■■□□□ 1.82
CBX4-201ENST00000269397 CCSMST1Q4G0I0 132 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 CBARPQ8N350 705 aaPredicted RBP26.4■■□□□ 1.82
CBX4-201ENST00000269397 HJURPQ8NCD3 748 aaPredicted RBP26.4■■□□□ 1.82
CBX4-201ENST00000269397 VPS37AQ8NEZ2 397 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 IL4I1Q96RQ9 567 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 SPATA6Q9NWH7 488 aaPredicted RBP26.4■■□□□ 1.82
CBX4-201ENST00000269397 MUTYHQ9UIF7 546 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 CKMT1AP12532 417 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 HBA1P69905 142 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 THOC6Q86W42 341 aaKnown RBP26.4■■□□□ 1.82
CBX4-201ENST00000269397 C2orf15Q8WU43 125 aaKnown RBP26.4■■□□□ 1.82
CBX4-201ENST00000269397 OR2A14Q96R47 310 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 CFL2Q9Y281 166 aa26.4■■□□□ 1.82
CBX4-201ENST00000269397 CA12O43570 354 aa26.39■■□□□ 1.82
CBX4-201ENST00000269397 SERPINA4P29622 427 aa26.39■■□□□ 1.82
CBX4-201ENST00000269397 CTSOP43234 321 aaPredicted RBP26.39■■□□□ 1.82
CBX4-201ENST00000269397 PXNP49023 591 aaPredicted RBP26.39■■□□□ 1.82
CBX4-201ENST00000269397 NAE1Q13564 534 aa26.39■■□□□ 1.82
CBX4-201ENST00000269397 TTC23LQ6PF05 361 aa26.39■■□□□ 1.82
CBX4-201ENST00000269397 TRIM39Q9HCM9 518 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms