RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TNRC18O15417 2968 aaPredicted RBP15.91■□□□□ 0.14
CCDC40-201ENST00000269318 LRRC72A6NJI9 287 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 VGLL3A8MV65 326 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 DEAF1O75398 565 aaPredicted RBP15.91■□□□□ 0.14
CCDC40-201ENST00000269318 APBB3O95704 486 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 EML2O95834 649 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 SERPINA1P01009 418 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 BSGP35613 385 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 SMAD4Q13485 552 aaKnown RBP15.91■□□□□ 0.14
CCDC40-201ENST00000269318 KRT33BQ14525 404 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 PRSS53Q2L4Q9 553 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 VMACQ2NL98 169 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 ZCCHC8Q6NZY4 707 aaKnown RBP15.91■□□□□ 0.14
CCDC40-201ENST00000269318 ABRAXAS1Q6UWZ7 409 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 CHRDL2Q6WN34 429 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 TFAP2CQ92754 450 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 POP5Q969H6 163 aaKnown RBP15.91■□□□□ 0.14
CCDC40-201ENST00000269318 PPCDCQ96CD2 204 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 SLC47A1Q96FL8 570 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 MSANTD3Q96H12 275 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 F2RL3Q96RI0 385 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 MAGIXQ9H6Y5 334 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 YY1AP1Q9H869 796 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 UTS2RQ9UKP6 389 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.91■□□□□ 0.14
CCDC40-201ENST00000269318 EI24O14681 340 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 LCMT2O60294 686 aaKnown RBP15.9■□□□□ 0.14
CCDC40-201ENST00000269318 CCNDBP1O95273 360 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 ABCB1P08183 1280 aaPredicted RBP15.9■□□□□ 0.14
CCDC40-201ENST00000269318 IL3P08700 152 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 MYBPC1Q00872 1141 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 ERICH5Q6P6B1 374 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 WASH2PQ6VEQ5 465 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 ADGRF3Q8IZF5 1079 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 OR4A15Q8NGL6 344 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 VPS50Q96JG6 964 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 ANKRD60Q9BZ19 345 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 KIR3DX1Q9H7L2 352 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 LHX9Q9NQ69 397 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 USP36Q9P275 1121 aaKnown RBP15.9■□□□□ 0.14
CCDC40-201ENST00000269318 ZNF282Q9UDV7 671 aaPredicted RBP15.9■□□□□ 0.14
CCDC40-201ENST00000269318 VPS4AQ9UN37 437 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 HEBP2Q9Y5Z4 205 aa15.9■□□□□ 0.14
CCDC40-201ENST00000269318 RNF103-CHMP3A0A140T963 221 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 OR1F1O43749 312 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 GPR37L1O60883 481 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 PPIBP23284 216 aaKnown RBP15.89■□□□□ 0.13
CCDC40-201ENST00000269318 AK4P27144 223 aaPredicted RBP15.89■□□□□ 0.13
CCDC40-201ENST00000269318 PEBP1P30086 187 aaKnown RBP15.89■□□□□ 0.13
CCDC40-201ENST00000269318 CLCN2P51788 898 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 HBA1P69905 142 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 CCNYL2Q5T2Q4 361 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 EID3Q8N140 333 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 PNPT1Q8TCS8 783 aaKnown RBP15.89■□□□□ 0.13
CCDC40-201ENST00000269318 CREB3L4Q8TEY5 395 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 HMGB4Q8WW32 186 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 CIDECQ96AQ7 238 aaPredicted RBP15.89■□□□□ 0.13
CCDC40-201ENST00000269318 SPATA9Q9BWV2 254 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 PCOLCE2Q9UKZ9 415 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 RTCAO00442 366 aaKnown RBP15.89■□□□□ 0.13
CCDC40-201ENST00000269318 TNFRSF10CO14798 259 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 LINGO3P0C6S8 592 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 HTR1BP28222 390 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 MVDP53602 400 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 C16orf72Q14CZ0 275 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 TBPL2Q6SJ96 375 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 UBE3DQ7Z6J8 389 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 PLD3Q8IV08 490 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 MMP21Q8N119 569 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 CLEC4FQ8N1N0 589 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 SYNPOQ8N3V7 929 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 TMEM145Q8NBT3 493 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 TSACCQ96A04 125 aaPredicted RBP15.89■□□□□ 0.13
CCDC40-201ENST00000269318 PYURFQ96I23 114 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 DPH2Q9BQC3 489 aaPredicted RBP15.89■□□□□ 0.13
CCDC40-201ENST00000269318 TRIM4Q9C037 500 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 SLC6A20Q9NP91 592 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 SPASTQ9UBP0 616 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 CORO2BQ9UQ03 480 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 WBP11Q9Y2W2 641 aaKnown RBP15.89■□□□□ 0.13
CCDC40-201ENST00000269318 COLEC10Q9Y6Z7 277 aa15.89■□□□□ 0.13
CCDC40-201ENST00000269318 TMEM265A0A087WTH1 108 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 TRBC2A0A5B9 178 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 CAPN5O15484 640 aaPredicted RBP15.88■□□□□ 0.13
CCDC40-201ENST00000269318 CLEC3AO75596 197 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 SEMA4FO95754 770 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 C6orf47O95873 294 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 IGLV3-19P01714 112 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 FAM58BPP0C7Q3 252 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 ZNF23P17027 643 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 HOXB6P17509 224 aaKnown RBP15.88■□□□□ 0.13
CCDC40-201ENST00000269318 ABATP80404 500 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 VEZF1Q14119 521 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 RGNQ15493 299 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 TMEM214Q6NUQ4 689 aaKnown RBP15.88■□□□□ 0.13
CCDC40-201ENST00000269318 Q6ZS52 159 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 APLFQ8IW19 511 aaPredicted RBP15.88■□□□□ 0.13
CCDC40-201ENST00000269318 FAM20CQ8IXL6 584 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 OR2L3Q8NG85 312 aa15.88■□□□□ 0.13
CCDC40-201ENST00000269318 CCL4L1Q8NHW4 92 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms