RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 REXO4Q9GZR2 422 aaKnown RBP13.47□□□□□ -0.25
SS18-201ENST00000269137 RMND5AQ9H871 391 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 DDX31Q9H8H2 851 aaKnown RBP13.47□□□□□ -0.25
SS18-201ENST00000269137 LHX9Q9NQ69 397 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 SLAMF8Q9P0V8 285 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 ATP6V1HQ9UI12 483 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 POMT2Q9UKY4 750 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 PCDHA9Q9Y5H5 950 aa13.47□□□□□ -0.25
SS18-201ENST00000269137 GABRR3A8MPY1 467 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 GPR37L1O60883 481 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 ENTPD5O75356 428 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 SORBS2O94875 1100 aaKnown RBP13.46□□□□□ -0.25
SS18-201ENST00000269137 UBXN7O94888 489 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 KCNH1O95259 989 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 COX7A2P14406 83 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 HOXD12P35452 270 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 RPL3P39023 403 aaKnown RBP13.46□□□□□ -0.25
SS18-201ENST00000269137 LSSP48449 732 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 CAPRIN1Q14444 709 aaKnown RBP13.46□□□□□ -0.25
SS18-201ENST00000269137 SHBQ15464 509 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 HKDC1Q2TB90 917 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 PGS1Q32NB8 556 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 ZNF528Q3MIS6 628 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 CCNYL2Q5T2Q4 361 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 FAM71E1Q6IPT2 247 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 ARMC6Q6NXE6 501 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 KIAA2013Q8IYS2 634 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 SLC25A45Q8N413 288 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 OR7A2PQ8NGA2 310 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 BAHD1Q8TBE0 780 aaPredicted RBP13.46□□□□□ -0.25
SS18-201ENST00000269137 RSC1A1Q92681 617 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 CCDC124Q96CT7 223 aaKnown RBP13.46□□□□□ -0.25
SS18-201ENST00000269137 MTERF3Q96E29 417 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 ITCHQ96J02 903 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 CGREF1Q99674 301 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 AICDAQ9GZX7 198 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 KCNH6Q9H252 994 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 REEP4Q9H6H4 257 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 SERHLQ9NQF3 203 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 EVA1BQ9NVM1 165 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 FAM120CQ9NX05 1096 aaKnown RBP13.46□□□□□ -0.25
SS18-201ENST00000269137 PILRAQ9UKJ1 303 aa13.46□□□□□ -0.25
SS18-201ENST00000269137 EXO1Q9UQ84 846 aaKnown RBP13.46□□□□□ -0.25
SS18-201ENST00000269137 PRORSD1PA6NEY8 169 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 SCN2BO60939 215 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 ERN1O75460 977 aaKnown RBP13.46□□□□□ -0.26
SS18-201ENST00000269137 SERPIND1P05546 499 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 TYRP1P17643 537 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 WNT3P56703 355 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 PDE7AQ13946 482 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 C6orf132Q5T0Z8 1188 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 LRIF1Q5T3J3 769 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 CPTPQ5TA50 214 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 OR4C11Q6IEV9 310 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 NANOGP8Q6NSW7 305 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 VN1R4Q7Z5H5 301 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 R3HCC1LQ7Z5L2 792 aaKnown RBP13.46□□□□□ -0.26
SS18-201ENST00000269137 BMP8AQ7Z5Y6 402 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 NUDT13Q86X67 352 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 TMEM132CQ8N3T6 1108 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 SRFBP1Q8NEF9 429 aaKnown RBP13.46□□□□□ -0.26
SS18-201ENST00000269137 CDC26Q8NHZ8 85 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 NT5CQ8TCD5 201 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 TMEM125Q96AQ2 219 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 MS4A6EQ96DS6 147 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 TM4SF19Q96DZ7 209 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 OR2A5Q96R48 311 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 SLC38A3Q99624 504 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 SORBS1Q9BX66 1292 aaKnown RBP13.46□□□□□ -0.26
SS18-201ENST00000269137 SLC6A16Q9GZN6 736 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 SEMA6CQ9H3T2 930 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 SYNPO2LQ9H987 977 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 NANOGQ9H9S0 305 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 CMTM6Q9NX76 183 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 SUCOQ9UBS9 1254 aaKnown RBP13.46□□□□□ -0.26
SS18-201ENST00000269137 PACSIN3Q9UKS6 424 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 A0A0C4DFX4 3053 aa13.46□□□□□ -0.26
SS18-201ENST00000269137 TMEM131Q92545 1883 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 A0A096LPI6 279 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 RTCAO00442 366 aaKnown RBP13.45□□□□□ -0.26
SS18-201ENST00000269137 NME4O00746 187 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 MAP3K7O43318 606 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 CTSVO60911 334 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 GBAP04062 536 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 PROS1P07225 676 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 GIMD1P0DJR0 217 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 LAMP1P11279 417 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 PIM1P11309 404 aaPredicted RBP13.45□□□□□ -0.26
SS18-201ENST00000269137 HSD17B1P14061 328 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 TSFMP43897 325 aaKnown RBP13.45□□□□□ -0.26
SS18-201ENST00000269137 CAPZBP47756 277 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 TRPC1P48995 793 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 MAPK12P53778 367 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 EPHA4P54764 986 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 TAS2R50P59544 299 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 STXBP1P61764 594 aaKnown RBP13.45□□□□□ -0.26
SS18-201ENST00000269137 TRA2BP62995 288 aaKnown RBP13.45□□□□□ -0.26
SS18-201ENST00000269137 CYP4F3Q08477 520 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 BNIP3Q12983 259 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 BIRC2Q13490 618 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms