RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 SORBS1Q9BX66 1292 aaKnown RBP15.63■□□□□ 0.09
TPM1-201ENST00000267996 MUC13Q9H3R2 512 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 ALG2Q9H553 416 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 ANKMY1Q9P2S6 941 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 SPASTQ9UBP0 616 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 AP3M1Q9Y2T2 418 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 PRSS51A0A1B0GVH4 220 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 YY2O15391 372 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 CAPN5O15484 640 aaPredicted RBP15.63■□□□□ 0.09
TPM1-201ENST00000267996 B3GALT4O96024 378 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 GBAP04062 536 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 C8BP07358 591 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 FURINP09958 794 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 HOXB3P14651 431 aaPredicted RBP15.63■□□□□ 0.09
TPM1-201ENST00000267996 ANPEPP15144 967 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 POLR2CP19387 275 aaPredicted RBP15.63■□□□□ 0.09
TPM1-201ENST00000267996 HTR1EP28566 365 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 RPL3P39023 403 aaKnown RBP15.63■□□□□ 0.09
TPM1-201ENST00000267996 TAS2R50P59544 299 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 HNRNPKP61978 463 aaKnown RBP eCLIP15.63■□□□□ 0.09
TPM1-201ENST00000267996 HHEXQ03014 270 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 RELAQ04206 551 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 SLC5A12Q1EHB4 618 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 DUOXA1Q1HG43 343 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 ZFP1Q6P2D0 407 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 TSSK4Q6SA08 328 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 R3HCC1LQ7Z5L2 792 aaKnown RBP15.63■□□□□ 0.09
TPM1-201ENST00000267996 WDR5BQ86VZ2 330 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 C17orf82Q86X59 251 aaPredicted RBP15.63■□□□□ 0.09
TPM1-201ENST00000267996 AVL9Q8NBF6 648 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 LMX1AQ8TE12 382 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 EDAQ92838 391 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 CCDC115Q96NT0 180 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 SH3GL1Q99961 368 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 CENPKQ9BS16 269 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 DUSP26Q9BV47 211 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 BHLHE41Q9C0J9 482 aaPredicted RBP15.63■□□□□ 0.09
TPM1-201ENST00000267996 DDX31Q9H8H2 851 aaKnown RBP15.63■□□□□ 0.09
TPM1-201ENST00000267996 SYNPO2LQ9H987 977 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 SLC6A13Q9NSD5 602 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 ACTR3BQ9P1U1 418 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 STOML1Q9UBI4 398 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 BTNL2Q9UIR0 455 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 KLHL20Q9Y2M5 609 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 PCDHB14Q9Y5E9 798 aa15.63■□□□□ 0.09
TPM1-201ENST00000267996 MDC1Q14676 2089 aaKnown RBP15.62■□□□□ 0.09
TPM1-201ENST00000267996 GOLGA4Q13439 2230 aaKnown RBP15.62■□□□□ 0.09
TPM1-201ENST00000267996 TCRBV3S1A0A5B6 114 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 C2orf74A8MZ97 194 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 B4DGG1 531 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 LMO7DNF2Z398 122 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 BCAT2O15382 392 aaPredicted RBP15.62■□□□□ 0.09
TPM1-201ENST00000267996 CDKN2CP42773 168 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 GSTM5P46439 218 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 FASLGP48023 281 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 FNTBP49356 437 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 CSNK1EP49674 416 aaKnown RBP15.62■□□□□ 0.09
TPM1-201ENST00000267996 MTPNP58546 118 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 RPS15AP62244 130 aaKnown RBP15.62■□□□□ 0.09
TPM1-201ENST00000267996 C2orf80Q0P641 193 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 SIM2Q14190 667 aaPredicted RBP15.62■□□□□ 0.09
TPM1-201ENST00000267996 CCNYL2Q5T2Q4 361 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 ANXA8L1Q5VT79 327 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 LCN8Q6JVE9 175 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 ANKRD26P1Q6NSI1 321 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 TRIM73Q86UV7 250 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 ANKRD46Q86W74 232 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 DHFR2Q86XF0 187 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 TMEM132CQ8N3T6 1108 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 MIEF2Q96C03 454 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 DUS3LQ96G46 650 aaKnown RBP15.62■□□□□ 0.09
TPM1-201ENST00000267996 CPPED1Q9BRF8 314 aaPredicted RBP15.62■□□□□ 0.09
TPM1-201ENST00000267996 IKZF5Q9H5V7 419 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 UCK1Q9HA47 277 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 ANGPTL2Q9UKU9 493 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 ERVK-11Q9UQG0 969 aa15.62■□□□□ 0.09
TPM1-201ENST00000267996 TECTAO75443 2155 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 RTCAO00442 366 aaKnown RBP15.61■□□□□ 0.09
TPM1-201ENST00000267996 RFXANKO14593 260 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 ZW10O43264 779 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 TBX19O60806 448 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 AFF3P51826 1226 aaKnown RBP15.61■□□□□ 0.09
TPM1-201ENST00000267996 CYP4F3Q08477 520 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 LRRC74AQ0VAA2 488 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 GTDC1Q4AE62 458 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 ZNF385BQ569K4 471 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 FBXO42Q6P3S6 717 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 OGFOD3Q6PK18 319 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 SPESP1Q6UW49 350 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 RNF111Q6ZNA4 994 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 NUDT13Q86X67 352 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 ZNF548Q8NEK5 533 aaPredicted RBP15.61■□□□□ 0.09
TPM1-201ENST00000267996 OR10G6Q8NH81 332 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 TM4SF18Q96CE8 201 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 MS4A6EQ96DS6 147 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 ZNF583Q96ND8 569 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 PHF12Q96QT6 1004 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 KCTD14Q9BQ13 255 aaPredicted RBP15.61■□□□□ 0.09
TPM1-201ENST00000267996 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.61■□□□□ 0.09
TPM1-201ENST00000267996 PILRAQ9UKJ1 303 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms