RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 TRPC4Q9UBN4 977 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 HCN2Q9UL51 889 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 ANKDD1BA6NHY2 528 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 NCR1O76036 304 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 DGKAP23743 735 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 GPR15P49685 360 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 HKDC1Q2TB90 917 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 LHFPL3Q86UP9 236 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 IQCF1Q8N6M8 205 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 SYT14Q8NB59 555 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 ARRDC4Q8NCT1 418 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 GJD4Q96KN9 370 aaPredicted RBP15.71■□□□□ 0.11
GPC1-201ENST00000264039 HYLS1Q96M11 299 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 NIPSNAP1Q9BPW8 284 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 NUDT15Q9NV35 164 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 ADAM30Q9UKF2 790 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 LOC105371267A0A1B0GV96 52 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 FZD9O00144 591 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 TLR4O00206 839 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 STX16O14662 325 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 GZMKP49863 264 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 VSX2P58304 361 aaPredicted RBP15.71■□□□□ 0.11
GPC1-201ENST00000264039 TAGLNQ01995 201 aaKnown RBP15.71■□□□□ 0.11
GPC1-201ENST00000264039 CLEC12AQ5QGZ9 265 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 PIK3R6Q5UE93 754 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 FKBP1CQ5VVH2 108 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 C11orf88Q6PI97 169 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 ABI3BPQ7Z7G0 1075 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 MARCH9Q86YJ5 346 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 TOP6BLQ8N6T0 577 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 TSGA13Q96PP4 275 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 TBX5Q99593 518 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 PAAF1Q9BRP4 392 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 A0A0D9SEW6 157 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 A0A0X1KG70 313 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 MANBAO00462 879 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 PROS1P07225 676 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 OGNP20774 298 aaKnown RBP15.71■□□□□ 0.11
GPC1-201ENST00000264039 DNASE1P24855 282 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 KIR2DL3P43628 341 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 ARHGDIBP52566 201 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 HK3P52790 923 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 TARDBPQ13148 414 aaKnown RBP eCLIP15.71■□□□□ 0.11
GPC1-201ENST00000264039 COL9A2Q14055 689 aaPredicted RBP15.71■□□□□ 0.11
GPC1-201ENST00000264039 IRF3Q14653 427 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 IFI44LQ53G44 452 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 XKR6Q5GH73 641 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 KDM4DQ6B0I6 523 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 PAQR6Q6TCH4 344 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 KDELC1Q6UW63 502 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 ZBTB44Q8NCP5 570 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.71■□□□□ 0.11
GPC1-201ENST00000264039 NFKBIL1Q9UBC1 381 aaPredicted RBP15.71■□□□□ 0.11
GPC1-201ENST00000264039 ACSL6Q9UKU0 697 aa15.71■□□□□ 0.11
GPC1-201ENST00000264039 CDK5RAP2Q96SN8 1893 aa15.71■□□□□ 0.1
GPC1-201ENST00000264039 IGKV6-21A0A0C4DH24 114 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 E2F3O00716 465 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 CELP19835 753 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 CPN2P22792 545 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 AFF1P51825 1210 aaKnown RBP15.7■□□□□ 0.1
GPC1-201ENST00000264039 PRAMEF19Q5SWL8 479 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 ZNF367Q7RTV3 350 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 ZMIZ2Q8NF64 920 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 ZFAND1Q8TCF1 268 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 SLC39A13Q96H72 371 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 HSPE1-MOB4S4R3N1 261 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 ARNTLO00327 626 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 HPGDSO60760 199 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 ALPIP09923 528 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 TYMPP19971 482 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 PBLDP30039 288 aaPredicted RBP15.7■□□□□ 0.1
GPC1-201ENST00000264039 GRK4P32298 578 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 RHOAP61586 193 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 SNTA1Q13424 505 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 FCN2Q15485 313 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 YIF1BQ5BJH7 314 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 FAM193BQ96PV7 902 aaPredicted RBP15.7■□□□□ 0.1
GPC1-201ENST00000264039 GTPBP2Q9BX10 602 aaKnown RBP15.7■□□□□ 0.1
GPC1-201ENST00000264039 KCNH6Q9H252 994 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 MCCC2Q9HCC0 563 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 TMEM30AQ9NV96 361 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 SEC14L4Q9UDX3 406 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 NDRG4Q9ULP0 352 aaKnown RBP15.7■□□□□ 0.1
GPC1-201ENST00000264039 POFUT2Q9Y2G5 429 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 RAI2Q9Y5P3 530 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 ZNF197O14709 1029 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 AOC2O75106 756 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 ENTPD6O75354 484 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 PDYNP01213 254 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 ALAS2P22557 587 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 ADRA1AP35348 466 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 GGT2P36268 569 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 UGT2B10P36537 528 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 CHIT1Q13231 466 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 CAPN13Q6MZZ7 669 aaPredicted RBP15.7■□□□□ 0.1
GPC1-201ENST00000264039 FBXL22Q6P050 247 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 FAM122CQ6P4D5 195 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 IDO2Q6ZQW0 420 aa15.7■□□□□ 0.1
GPC1-201ENST00000264039 CCDC117Q8IWD4 279 aaPredicted RBP15.7■□□□□ 0.1
GPC1-201ENST00000264039 C9orf43Q8TAL5 461 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms