RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 KCNC3Q14003 757 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 DMC1Q14565 340 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 DUOXA1Q1HG43 343 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 XKR6Q5GH73 641 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 SERPINA11Q86U17 422 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 SYT12Q8IV01 421 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 SYTL1Q8IYJ3 562 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 OR6F1Q8NGZ6 308 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 MAGEB10Q96LZ2 347 aaPredicted RBP21.75■■□□□ 1.07
MCF2L-201ENST00000261963 MTERF1Q99551 399 aaKnown RBP21.75■■□□□ 1.07
MCF2L-201ENST00000261963 FAM83CQ9BQN1 747 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 SPATA6Q9NWH7 488 aaPredicted RBP21.75■■□□□ 1.07
MCF2L-201ENST00000261963 FBXO10Q9UK96 956 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 HIDE1A8MVS5 230 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 APOA1P02647 267 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 UGT2B10P36537 528 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 EPHA5P54756 1037 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 DEFA1P59665 94 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 DEFA3P59666 94 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 ERVFC1P60507 584 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 CXCR4P61073 352 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 DOC2AQ14183 400 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 PRR23CQ6ZRP0 262 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 KIAA0907Q7Z7F0 614 aaPredicted RBP21.75■■□□□ 1.07
MCF2L-201ENST00000261963 CELF2-AS1Q8N7Q2 184 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 ZNF540Q8NDQ6 660 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 OR4K3Q96R72 315 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 CRISPLD2Q9H0B8 497 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 VPS29Q9UBQ0 182 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 PLXNA2O75051 1894 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 YY2O15391 372 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 TGFBR2P37173 567 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 PREPP48147 710 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 SF1Q15637 639 aaKnown RBP21.74■■□□□ 1.07
MCF2L-201ENST00000261963 TPRG1LQ5T0D9 272 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 PARP16Q8N5Y8 322 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 TRIM43Q96BQ3 446 aaPredicted RBP21.74■■□□□ 1.07
MCF2L-201ENST00000261963 C11orf24Q96F05 449 aaPredicted RBP21.74■■□□□ 1.07
MCF2L-201ENST00000261963 ARPC5LQ9BPX5 153 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 ZBTB20Q9HC78 741 aaPredicted RBP21.74■■□□□ 1.07
MCF2L-201ENST00000261963 ITM2CQ9NQX7 267 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 AASDHPPTQ9NRN7 309 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 NFKBIL1Q9UBC1 381 aaPredicted RBP21.74■■□□□ 1.07
MCF2L-201ENST00000261963 HCFC2Q9Y5Z7 792 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 CLIC1O00299 241 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 FPGTO14772 594 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 CCNDBP1O95273 360 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 NAE1Q13564 534 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 CDK10Q15131 360 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 OTOP2Q7RTS6 562 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 GPR155Q7Z3F1 870 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 TECPR1Q7Z6L1 1165 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 ZDHHC21Q8IVQ6 265 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 ZZZ3Q8IYH5 903 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 RASGEF1AQ8N9B8 481 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 BTN2A2Q8WVV5 523 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 PANX1Q96RD7 426 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 ZSCAN5AQ9BUG6 496 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 CCNB1IP1Q9NPC3 277 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 STOX2Q9P2F5 926 aaPredicted RBP21.74■■□□□ 1.07
MCF2L-201ENST00000261963 AASSQ9UDR5 926 aa21.74■■□□□ 1.07
MCF2L-201ENST00000261963 PRMT3O60678 531 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 ENGP17813 658 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 S100A5P33763 92 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 SRSF11Q05519 484 aaKnown RBP21.73■■□□□ 1.07
MCF2L-201ENST00000261963 DDX39BQ13838 428 aaKnown RBP21.73■■□□□ 1.07
MCF2L-201ENST00000261963 ZNF77Q15935 545 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 POM121L1PQ3SYA9 428 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 CPZQ66K79 652 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 ADNP2Q6IQ32 1131 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 ZCCHC8Q6NZY4 707 aaKnown RBP21.73■■□□□ 1.07
MCF2L-201ENST00000261963 AGTRAPQ6RW13 159 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 SPATC1Q76KD6 591 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 HIPK1Q86Z02 1210 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 POP5Q969H6 163 aaKnown RBP21.73■■□□□ 1.07
MCF2L-201ENST00000261963 MED30Q96HR3 178 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 DEPDC7Q96QD5 511 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 BARD1Q99728 777 aaKnown RBP21.73■■□□□ 1.07
MCF2L-201ENST00000261963 TCF25Q9BQ70 676 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 ABCG2Q9UNQ0 655 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 BTBD3Q9Y2F9 522 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 WNT6Q9Y6F9 365 aa21.73■■□□□ 1.07
MCF2L-201ENST00000261963 KCNK5O95279 499 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 ETHE1O95571 254 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 ZNF682O95780 498 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 TIMP1P01033 207 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 HOXB6P17509 224 aaKnown RBP21.72■■□□□ 1.07
MCF2L-201ENST00000261963 OR2B6P58173 313 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 GNG2P59768 71 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 RACK1P63244 317 aaKnown RBP21.72■■□□□ 1.07
MCF2L-201ENST00000261963 ZNF33BQ06732 778 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 PTOV1Q86YD1 416 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 PEX5LQ8IYB4 626 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 CLECL1Q8IZS7 167 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 RASSF5Q8WWW0 418 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 CLP1Q92989 425 aaKnown RBP21.72■■□□□ 1.07
MCF2L-201ENST00000261963 TIFAQ96CG3 184 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 A3GALT2U3KPV4 340 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 ZW10O43264 779 aa21.72■■□□□ 1.07
MCF2L-201ENST00000261963 MITFO75030 526 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms