RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 EPHA6Q9UF33 1036 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 IL36AQ9UHA7 158 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 ELF5Q9UKW6 265 aaPredicted RBP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 SNURFLB1AK76 121 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 NPIPA3F8WFD2 350 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 GRID2O43424 1007 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 NOL3O60936 208 aaKnown RBP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 KERAO60938 352 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 MOCS2O96007 188 aaPredicted RBP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 PNPP00491 289 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 KRT3P12035 628 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 SKILP12757 684 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 SOAT1P35610 550 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 FRKP42685 505 aaPredicted RBP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 IER3P46695 156 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 KCNJ1P48048 391 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 TKTL1P51854 596 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 SARNPP82979 210 aaKnown RBP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 SP3Q02447 781 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 GUCY2DQ02846 1103 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 TRA2AQ13595 282 aaKnown RBP eCLIP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 ZER1Q7Z7L7 766 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 MEX3DQ86XN8 651 aaKnown RBP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 CTCFLQ8NI51 663 aaPredicted RBP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 MRGPRDQ8TDS7 321 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 C17orf50Q8WW18 174 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 NR4A3Q92570 626 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 BTBD9Q96Q07 612 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 FUT8Q9BYC5 575 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 ZNF350Q9GZX5 532 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 IQCGQ9H095 443 aaKnown RBP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 WDR13Q9H1Z4 485 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 RIMS4Q9H426 269 aaPredicted RBP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 RWDD1Q9H446 243 aaPredicted RBP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 EGLN3Q9H6Z9 239 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 MID1IP1Q9NPA3 183 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 HOOK1Q9UJC3 728 aaKnown RBP3.87□□□□□ -1.79
CCDC54-201ENST00000261058 LAMP5Q9UJQ1 280 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 PILRBQ9UKJ0 227 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 GPR132Q9UNW8 380 aa3.87□□□□□ -1.79
CCDC54-201ENST00000261058 ILVBLA1L0T0 632 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 SDR42E2A6NKP2 422 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 TMCO5BA8MYB1 307 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 CASQ2O14958 399 aaPredicted RBP3.86□□□□□ -1.79
CCDC54-201ENST00000261058 BBOX1O75936 387 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 SNX4O95219 450 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 YES1P07947 543 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 HOXD10P28358 340 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 SFTPDP35247 375 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 OR3A2P47893 321 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 POLR2FP61218 127 aaKnown RBP3.86□□□□□ -1.79
CCDC54-201ENST00000261058 HTD2P86397 168 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 ACTN3Q08043 901 aaPredicted RBP3.86□□□□□ -1.79
CCDC54-201ENST00000261058 LASP1Q14847 261 aaKnown RBP3.86□□□□□ -1.79
CCDC54-201ENST00000261058 EFTUD2Q15029 972 aaKnown RBP eCLIP3.86□□□□□ -1.79
CCDC54-201ENST00000261058 TOR1AIP1Q5JTV8 583 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 TTC27Q6P3X3 843 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 FUT10Q6P4F1 479 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 BHLHB9Q6PI77 547 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 GBP6Q6ZN66 633 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 Q6ZSR9 355 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 FCRLAQ7L513 359 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 PRUNE1Q86TP1 453 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 KLHL7Q8IXQ5 586 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 GPC2Q8N158 579 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 PRSS35Q8N3Z0 413 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 CCDC63Q8NA47 563 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 IPMKQ8NFU5 416 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 SAP25Q8TEE9 199 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 METTL21AQ8WXB1 218 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 BSCL2Q96G97 398 aaPredicted RBP3.86□□□□□ -1.79
CCDC54-201ENST00000261058 RBM41Q96IZ5 413 aaKnown RBP3.86□□□□□ -1.79
CCDC54-201ENST00000261058 VPS39Q96JC1 886 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 TMEM237Q96Q45 408 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 ATG101Q9BSB4 218 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 CRACR2AQ9BSW2 395 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 P2RY12Q9H244 342 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 LIN28AQ9H9Z2 209 aaKnown RBP3.86□□□□□ -1.79
CCDC54-201ENST00000261058 FGF22Q9HCT0 170 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 FANCFQ9NPI8 374 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 MED4Q9NPJ6 270 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.86□□□□□ -1.79
CCDC54-201ENST00000261058 ARMCX3Q9UH62 379 aaPredicted RBP3.86□□□□□ -1.79
CCDC54-201ENST00000261058 NOCTQ9UK39 431 aaKnown RBP3.86□□□□□ -1.79
CCDC54-201ENST00000261058 FBXL5Q9UKA1 691 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 FBXL4Q9UKA2 621 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 WDR37Q9Y2I8 494 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 ANGPTL3Q9Y5C1 460 aa3.86□□□□□ -1.79
CCDC54-201ENST00000261058 PIK3R4Q99570 1358 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 TRAV18A0A075B6X5 111 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 A0A0U1RQK1 487 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 ZNF320A2RRD8 509 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 C15orf61A6NNL5 157 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 KINO60870 393 aaKnown RBP3.85□□□□□ -1.79
CCDC54-201ENST00000261058 E2F6O75461 281 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 STAM2O75886 525 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 SLC16A8O95907 504 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 HEXBP07686 556 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 CYP2A7P20853 494 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 RBMS1P29558 406 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms