RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TMEM126BQ8IUX1 230 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.73■□□□□ 0.75
RTCA-201ENST00000260563 TTC29Q8NA56 475 aaPredicted RBP19.73■□□□□ 0.75
RTCA-201ENST00000260563 TTLQ8NG68 377 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 OR7G3Q8NG95 312 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 ZNF285Q96NJ3 590 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 SLC46A1Q96NT5 459 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 OR52B2Q96RD2 323 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 HBEGFQ99075 208 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 NLNQ9BYT8 704 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 NT5DC2Q9H857 520 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 TCF7L2Q9NQB0 619 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 ZFP69BQ9UJL9 534 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 ANGPTL2Q9UKU9 493 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 PCDHGA3Q9Y5H0 932 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 ATP6AP2A0A1C7CYW4 349 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 TRABD2BA6NFA1 517 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 C9orf172C9J069 976 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 SLC28A1O00337 649 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 SCRG1O75711 98 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 ATP6AP2O75787 350 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 CTSBP07858 339 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 SLC35G6P0C7Q6 338 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 GSTM2P28161 218 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 WASHC2DQ5SRD0 308 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 C10orf62Q5T681 223 aaPredicted RBP19.72■□□□□ 0.75
RTCA-201ENST00000260563 TLDC1Q6P9B6 456 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 TRIM46Q7Z4K8 759 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 VN1R4Q7Z5H5 301 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 CSNK1A1LQ8N752 337 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 ANKRD53Q8N9V6 530 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 ACTRT2Q8TDY3 377 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 CCDC28BQ9BUN5 200 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 B3GNT4Q9C0J1 378 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 SPRTNQ9H040 489 aaPredicted RBP19.72■□□□□ 0.75
RTCA-201ENST00000260563 PRM3Q9NNZ6 103 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 RIC8BQ9NVN3 520 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 TSC22D4Q9Y3Q8 395 aa19.72■□□□□ 0.75
RTCA-201ENST00000260563 SERTM1A2A2V5 107 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 H3BMH7 237 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 TXNDC9O14530 226 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 NDUFS4O43181 175 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 BRINP1O60477 761 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 VPS4BO75351 444 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 DXOO77932 396 aaKnown RBP19.71■□□□□ 0.75
RTCA-201ENST00000260563 TIAF1O95411 115 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 CYP4F2P78329 520 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 SHC2P98077 582 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 GRM7Q14831 915 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 LSM12Q3MHD2 195 aaKnown RBP19.71■□□□□ 0.75
RTCA-201ENST00000260563 NXNQ6DKJ4 435 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 PWWP2BQ6NUJ5 590 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 CAMKVQ8NCB2 501 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 OR2T11Q8NH01 316 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 HUS1BQ8NHY5 278 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 SLC13A3Q8WWT9 602 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 SLC7A5P2Q9GIP4 190 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 STARD5Q9NSY2 213 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 FOXJ2Q9P0K8 574 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 AP1M2Q9Y6Q5 423 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 FER1L5A0AVI2 2057 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 MED19A0JLT2 244 aaPredicted RBP19.71■□□□□ 0.75
RTCA-201ENST00000260563 ANKDD1BA6NHY2 528 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 P2RX6O15547 441 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 RGS14O43566 566 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 STATHP02808 62 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 SERPIND1P05546 499 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 DDX39BQ13838 428 aaKnown RBP19.71■□□□□ 0.75
RTCA-201ENST00000260563 IMPG1Q17R60 797 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 HKDC1Q2TB90 917 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 ADNP2Q6IQ32 1131 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 Q6ZSR9 355 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 LARP4Q71RC2 724 aaKnown RBP eCLIP19.71■□□□□ 0.75
RTCA-201ENST00000260563 TRPV3Q8NET8 790 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 CEP70Q8NHQ1 597 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 TUBGCP3Q96CW5 907 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 MTERF1Q99551 399 aaKnown RBP19.71■□□□□ 0.75
RTCA-201ENST00000260563 ULBP3Q9BZM4 244 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 AKTIPQ9H8T0 292 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 ASCL3Q9NQ33 180 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 ENAMQ9NRM1 1142 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 THSD1Q9NS62 852 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 HEY2Q9UBP5 337 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 RUVBL1Q9Y265 456 aaKnown RBP19.71■□□□□ 0.75
RTCA-201ENST00000260563 PCDHB3Q9Y5E6 796 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 PCDHGA7Q9Y5G6 932 aa19.71■□□□□ 0.75
RTCA-201ENST00000260563 CDRT15L2A8MXV6 281 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 NVLO15381 856 aaKnown RBP19.7■□□□□ 0.74
RTCA-201ENST00000260563 ZNF749O43361 778 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 CPNE3O75131 537 aaKnown RBP19.7■□□□□ 0.74
RTCA-201ENST00000260563 PHEXP78562 749 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 RGS1Q08116 209 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 CSTF3Q12996 717 aaKnown RBP19.7■□□□□ 0.74
RTCA-201ENST00000260563 RNF175Q8N4F7 328 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 GBP7Q8N8V2 638 aaPredicted RBP19.7■□□□□ 0.74
RTCA-201ENST00000260563 TM4SF19Q96DZ7 209 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 NDC1Q9BTX1 674 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 ACPTQ9BZG2 426 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 RHBGQ9H310 441 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 ACTR5Q9H9F9 607 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms