RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PYROXD2Q8N2H3 581 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TOMM5Q8N4H5 51 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 OR8D1Q8WZ84 308 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 QRFPRQ96P65 431 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC38A3Q99624 504 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TTYH3Q9C0H2 523 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 DEFB129Q9H1M3 183 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 C2orf40Q9H1Z8 148 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF69Q9UC07 566 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 NPIPA1Q9UND3 350 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PCDHGA5Q9Y5G8 931 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 GATBO75879 557 aaKnown RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 IFNA2P01563 188 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ALPLP05186 524 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 APRTP07741 180 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 CYP4B1P13584 511 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 IDH2P48735 452 aaKnown RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 FABP9Q0Z7S8 132 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 TATDN3Q17R31 274 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 FKBP1CQ5VVH2 108 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 LEMD1Q68G75 181 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 JMJD6Q6NYC1 403 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 PRSS55Q6UWB4 352 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SPOCD1Q6ZMY3 1216 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF836Q6ZNA1 936 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 MILR1Q7Z6M3 343 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 PPP1R3BQ86XI6 285 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 KDM8Q8N371 416 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ARRDC4Q8NCT1 418 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 WFIKKN1Q96NZ8 548 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ZPBPQ9BS86 351 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 RIOX1Q9H6W3 641 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 PRMT7Q9NVM4 692 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC17A7Q9P2U7 560 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ADAM18Q9Y3Q7 739 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 PCDHA10Q9Y5I2 948 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 MN1Q10571 1320 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ERI2A8K979 691 aaKnown RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 CBX4O00257 560 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 PIP5K1CO60331 668 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 CYC1P08574 325 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ADORA3P0DMS8 318 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ANXA7P20073 488 aaKnown RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SSTR2P30874 369 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 RARRES1P49788 294 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 NFKB2Q00653 900 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF91Q05481 1191 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SRSF11Q05519 484 aaKnown RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 HMGN3Q15651 99 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 KCTD19Q17RG1 926 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 HEATR6Q6AI08 1181 aaKnown RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SMARCD3Q6STE5 483 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 CASP12Q6UXS9 341 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 RASGEF1CQ8N431 466 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 CAMKVQ8NCB2 501 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 TSTD1Q8NFU3 115 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 OR2A12Q8NGT7 310 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 WFIKKN2Q8TEU8 576 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC35C1Q96A29 364 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 CERS2Q96G23 380 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ADAD1Q96M93 576 aaKnown RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 MXRA8Q9BRK3 442 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 MSTO1Q9BUK6 570 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SAP130Q9H0E3 1048 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 NANOGQ9H9S0 305 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 NLKQ9UBE8 527 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 K7EPK0 472 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 PDXKO00764 312 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 RAD1O60671 282 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 T-ENOLP0DO92 83 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 CREB1P16220 341 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 TGM1P22735 817 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SGCGQ13326 291 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC35F1Q5T1Q4 408 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 PRAMEF20Q5VT98 475 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 DENND1BQ6P3S1 775 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 DNM1P34Q6PK57 102 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF813Q6ZN06 617 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ASB18Q6ZVZ8 466 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 LINGO2Q7L985 606 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 FAM71E2Q8N5Q1 922 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 OR52H1Q8NGJ2 320 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SCARB1Q8WTV0 552 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 TECTBQ96PL2 329 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SEPT5Q99719 369 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 CBWD1Q9BRT8 395 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ELOVL1Q9BW60 279 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC6A14Q9UN76 642 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 PCDHA11Q9Y5I1 949 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SIGLEC16A6NMB1 481 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 BBIP1A8MTZ0 92 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 D6RAR5 112 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 GCATO75600 419 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SCGNO76038 276 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 HLA-DMAP28067 261 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 MAPK8P45983 427 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 CPT1AP50416 773 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 MAP2K6P52564 334 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 NDST1P52848 882 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 FBXO46Q6PJ61 603 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms