RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 LAMP1P11279 417 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 GRIA3P42263 894 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 RPS9P46781 194 aaKnown RBP18.07■□□□□ 0.48
TRIM47-201ENST00000254816 MC1RQ01726 317 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 MTX3Q5HYI7 312 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 GALNT18Q6P9A2 607 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 SLC9B2Q86UD5 537 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 NAGSQ8N159 534 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 CADM4Q8NFZ8 388 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 LRRC61Q9BV99 259 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 PAIP1Q9H074 479 aaKnown RBP18.07■□□□□ 0.48
TRIM47-201ENST00000254816 Q9H521 79 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 IKZF5Q9H5V7 419 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 RAB26Q9ULW5 256 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 EXO1Q9UQ84 846 aaKnown RBP18.07■□□□□ 0.48
TRIM47-201ENST00000254816 MYOCOSA0A1B0GUC4 107 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 GABRR3A8MPY1 467 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 SCAMP2O15127 329 aaKnown RBP18.07■□□□□ 0.48
TRIM47-201ENST00000254816 YY2O15391 372 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 PDGFBP01127 241 aaPredicted RBP18.07■□□□□ 0.48
TRIM47-201ENST00000254816 HSD17B1P14061 328 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 BCL6P41182 706 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 KIR3DL1P43629 444 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 WNT3P56703 355 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 KHDRBS2Q5VWX1 349 aaKnown RBP18.07■□□□□ 0.48
TRIM47-201ENST00000254816 TSSK4Q6SA08 328 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 ZNF761Q86XN6 746 aaPredicted RBP18.07■□□□□ 0.48
TRIM47-201ENST00000254816 MFSD2AQ8NA29 543 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 OR10G6Q8NH81 332 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 SLC37A2Q8TED4 501 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 NT5DC2Q9H857 520 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 SYNPO2LQ9H987 977 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 CPNE7Q9UBL6 633 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 PCDHB14Q9Y5E9 798 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 SPAG17Q6Q759 2223 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 SDK1Q7Z5N4 2213 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 TIPRLO75663 272 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 PGM3O95394 542 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 CMPK1P30085 196 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 ZNF763Q0D2J5 394 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 LIN52Q52LA3 116 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 DEPDC1Q5TB30 811 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 HMBOX1Q6NT76 420 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 TRIM73Q86UV7 250 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 C16orf78Q8WTQ4 265 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 AURKBQ96GD4 344 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-201ENST00000254816 KCTD14Q9BQ13 255 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-201ENST00000254816 FAM192AQ9GZU8 254 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 COQ10BQ9H8M1 238 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 TMEM184CQ9NVA4 438 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 SIRT5Q9NXA8 310 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 A0A0G2JN53 185 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 PRMT3O60678 531 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 CAPNS1P04632 268 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 SMIM18P0DKX4 95 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 NCK1P16333 377 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 ZNF26P17031 533 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-201ENST00000254816 POLR2CP19387 275 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-201ENST00000254816 SLC7A1P30825 629 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 ASMTP46597 345 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 CLECL1Q8IZS7 167 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 FAM46DQ8NEK8 389 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 CANT1Q8WVQ1 401 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 ITCHQ96J02 903 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 SPACA7Q96KW9 195 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 ZNF717Q9BY31 904 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-201ENST00000254816 KCNH6Q9H252 994 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 RMND5AQ9H871 391 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 TM9SF3Q9HD45 589 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 ADGRE2Q9UHX3 823 aa18.06■□□□□ 0.48
TRIM47-201ENST00000254816 OR6C74A6NCV1 312 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 B4DGG1 531 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 PPM1DO15297 605 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 C1QCP02747 245 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 TPP2P29144 1249 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-201ENST00000254816 BLKP51451 505 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 POLE2P56282 527 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 TAS2R50P59544 299 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 RACK1P63244 317 aaKnown RBP18.05■□□□□ 0.48
TRIM47-201ENST00000254816 ABATP80404 500 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 SRSF11Q05519 484 aaKnown RBP18.05■□□□□ 0.48
TRIM47-201ENST00000254816 CYP4F3Q08477 520 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 MMP21Q8N119 569 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.05■□□□□ 0.48
TRIM47-201ENST00000254816 CREB3L4Q8TEY5 395 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 PPWD1Q96BP3 646 aaKnown RBP18.05■□□□□ 0.48
TRIM47-201ENST00000254816 CIB1Q99828 191 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 CENPKQ9BS16 269 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 THUMPD3Q9BV44 507 aaKnown RBP18.05■□□□□ 0.48
TRIM47-201ENST00000254816 AICDAQ9GZX7 198 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 SH3BP4Q9P0V3 963 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 ERVK-11Q9UQG0 969 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 MAN2B2Q9Y2E5 1009 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 TRBC2A0A5B9 178 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 C7orf72A4D263 438 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 TLR4O00206 839 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 SCN2BO60939 215 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 STAMBPO95630 424 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 GRK3P35626 688 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 EEFSECP57772 596 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms