RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 C17orf62Q9BQA9 187 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 ADAM7Q9H2U9 754 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 LOC100130705A0A1B0GUX0 176 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 ZNF879B4DU55 563 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 NPIPA5E9PKD4 350 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 ORC5O43913 435 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 RNGTTO60942 597 aaKnown RBP18.32■□□□□ 0.52
PTPRE-201ENST00000254667 CTSAP10619 480 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 HMGCLP35914 325 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 AGTR2P50052 363 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 ADAM8P78325 824 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 ZFP69Q49AA0 526 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 COQ8BQ96D53 544 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 C8orf33Q9H7E9 229 aaPredicted RBP18.32■□□□□ 0.52
PTPRE-201ENST00000254667 TRIM39Q9HCM9 518 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 NPIPA1Q9UND3 350 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 MGAT4BQ9UQ53 548 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 A0A096LPI6 279 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 TCRBV21S2A2A0A5A6 115 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 H7BY64 318 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 KCNJ13O60928 360 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 PON3Q15166 354 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 PRAP1Q96NZ9 151 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 A0A1W2PP55 124 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 WASHC1A8K0Z3 465 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 WASH3PC4AMC7 463 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 AHSA1O95433 338 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 ALDOAP04075 364 aaKnown RBP18.32■□□□□ 0.52
PTPRE-201ENST00000254667 ZNF12P17014 697 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 LASP1Q14847 261 aaKnown RBP18.32■□□□□ 0.52
PTPRE-201ENST00000254667 WASH2PQ6VEQ5 465 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 ASPGQ86U10 573 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 RNF130Q86XS8 419 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 AQP11Q8NBQ7 271 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 FIBINQ8TAL6 211 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 HCN4Q9Y3Q4 1203 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 GRIP1Q9Y3R0 1128 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 A8MU76 341 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 ZNF670-ZNF695F2Z2N8 137 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 OXTRP30559 389 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 PLGLB1Q02325 96 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 GRIK2Q13002 908 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 TRAM2Q15035 370 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 FAM182AQ5T1J6 154 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 PNLDC1Q8NA58 520 aaKnown RBP18.32■□□□□ 0.52
PTPRE-201ENST00000254667 IL4I1Q96RQ9 567 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 TRIM36Q9NQ86 728 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 TAS2R9Q9NYW1 312 aa18.32■□□□□ 0.52
PTPRE-201ENST00000254667 ENDOUP21128 410 aaKnown RBP18.31■□□□□ 0.52
PTPRE-201ENST00000254667 ACSL1P33121 698 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 RABL3Q5HYI8 236 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 RASGEF1AQ8N9B8 481 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 TMEM40Q8WWA1 233 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 TMEM74Q96NL1 305 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 RNF121Q9H920 327 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 PDLIM1O00151 329 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 EIF3FO00303 357 aaPredicted RBP18.31■□□□□ 0.52
PTPRE-201ENST00000254667 DFNA5O60443 496 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 TYRP1P17643 537 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 AZGP1P25311 298 aaKnown RBP18.31■□□□□ 0.52
PTPRE-201ENST00000254667 SLC6A6P31641 620 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 GALK1P51570 392 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 FADDQ13158 208 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 PM20D1Q6GTS8 502 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 PHOSPHO1Q8TCT1 267 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 RDH12Q96NR8 316 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 CST11Q9H112 138 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 PTGES2Q9H7Z7 377 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 RC3H2Q9HBD1 1191 aaKnown RBP18.31■□□□□ 0.52
PTPRE-201ENST00000254667 HHATLQ9HCP6 504 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 SCN11AQ9UI33 1791 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 JUPP14923 745 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 FDXRP22570 491 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 TIA1P31483 386 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTPRE-201ENST00000254667 GGT5P36269 586 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 KCNC1P48547 511 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 ZNF689Q96CS4 500 aaPredicted RBP18.31■□□□□ 0.52
PTPRE-201ENST00000254667 ADAD1Q96M93 576 aaKnown RBP18.31■□□□□ 0.52
PTPRE-201ENST00000254667 BAZ2AQ9UIF9 1905 aaKnown RBP18.31■□□□□ 0.52
PTPRE-201ENST00000254667 ARL6IP5O75915 188 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 STATHP02808 62 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 ZBED5Q49AG3 693 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 RASSF6Q6ZTQ3 369 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 RTP4Q96DX8 246 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 PKP2Q99959 881 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 PELOQ9BRX2 385 aaKnown RBP18.31■□□□□ 0.52
PTPRE-201ENST00000254667 ITPAQ9BY32 194 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 METTL7AQ9H8H3 244 aa18.31■□□□□ 0.52
PTPRE-201ENST00000254667 AHDC1Q5TGY3 1603 aaPredicted RBP18.31■□□□□ 0.52
PTPRE-201ENST00000254667 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.3■□□□□ 0.52
PTPRE-201ENST00000254667 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.3■□□□□ 0.52
PTPRE-201ENST00000254667 C8orf89P0DMQ9 161 aa18.3■□□□□ 0.52
PTPRE-201ENST00000254667 GFOD2Q3B7J2 385 aa18.3■□□□□ 0.52
PTPRE-201ENST00000254667 ZNF550Q7Z398 422 aa18.3■□□□□ 0.52
PTPRE-201ENST00000254667 MEAF6Q9HAF1 191 aa18.3■□□□□ 0.52
PTPRE-201ENST00000254667 TUBA8Q9NY65 449 aaPredicted RBP18.3■□□□□ 0.52
PTPRE-201ENST00000254667 FAM172BPA6NC97 362 aa18.3■□□□□ 0.52
PTPRE-201ENST00000254667 ZNF208O43345 1280 aa18.3■□□□□ 0.52
PTPRE-201ENST00000254667 APBB3O95704 486 aa18.3■□□□□ 0.52
PTPRE-201ENST00000254667 MAGP20916 626 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms