RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TRIM46Q7Z4K8 759 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 SLC38A9Q8NBW4 561 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 KCT2Q8NC54 265 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 OR2L5Q8NG80 312 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 LRRC8CQ8TDW0 803 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 DYDC1Q8WWB3 177 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 SELENOMQ8WWX9 145 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 MS4A6EQ96DS6 147 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 C7orf26Q96N11 449 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 GBP5Q96PP8 586 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 MTERF1Q99551 399 aaKnown RBP13.42□□□□□ -0.26
VPS25-201ENST00000253794 CCT7Q99832 543 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 FAM117AQ9C073 453 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 ILKAPQ9H0C8 392 aaPredicted RBP13.42□□□□□ -0.26
VPS25-201ENST00000253794 CCDC134Q9H6E4 229 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 CLK4Q9HAZ1 481 aaKnown RBP13.42□□□□□ -0.26
VPS25-201ENST00000253794 THSD1Q9NS62 852 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 STARD5Q9NSY2 213 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 ZDHHC2Q9UIJ5 367 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 ANGPTL2Q9UKU9 493 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 DNAJC15Q9Y5T4 150 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 AGRPO00253 132 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 FOXS1O43638 330 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 STK17BO94768 372 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 KIAA0754O94854 1291 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 SCELO95171 688 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 NSA2O95478 260 aaKnown RBP13.41□□□□□ -0.26
VPS25-201ENST00000253794 PDYNP01213 254 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 ZNF28P17035 718 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 ALOX12P18054 663 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 PRPH2P23942 346 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 HTR6P50406 440 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 NEK2P51955 445 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 RPS13P62277 151 aaKnown RBP13.41□□□□□ -0.26
VPS25-201ENST00000253794 CYP4F2P78329 520 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 ABRAXAS2Q15018 415 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 TCHHL1Q5QJ38 904 aaPredicted RBP13.41□□□□□ -0.26
VPS25-201ENST00000253794 SH2D4BQ5SQS7 431 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 PRAMEF17Q5VTA0 474 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 TTC19Q6DKK2 380 aaPredicted RBP13.41□□□□□ -0.26
VPS25-201ENST00000253794 CLEC6AQ6EIG7 209 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 PRMT9Q6P2P2 845 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 ABHD17CQ6PCB6 329 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 FOXR1Q6PIV2 292 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 DTX1Q86Y01 620 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 DSELQ8IZU8 1212 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 ZNF781Q8N8C0 355 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 SRFBP1Q8NEF9 429 aaKnown RBP13.41□□□□□ -0.26
VPS25-201ENST00000253794 UTP15Q8TED0 518 aaKnown RBP13.41□□□□□ -0.26
VPS25-201ENST00000253794 GATA6Q92908 595 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 SERPINI1Q99574 410 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 MACROD1Q9BQ69 325 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 TMEM121BQ9BXQ6 578 aaPredicted RBP13.41□□□□□ -0.26
VPS25-201ENST00000253794 ULBP3Q9BZM4 244 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 REXO4Q9GZR2 422 aaKnown RBP13.41□□□□□ -0.26
VPS25-201ENST00000253794 ZNF395Q9H8N7 513 aaPredicted RBP13.41□□□□□ -0.26
VPS25-201ENST00000253794 FARSBQ9NSD9 589 aaKnown RBP13.41□□□□□ -0.26
VPS25-201ENST00000253794 MRPS2Q9Y399 296 aaKnown RBP13.41□□□□□ -0.26
VPS25-201ENST00000253794 CCL27Q9Y4X3 112 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 TIMM22Q9Y584 194 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 FREM2Q5SZK8 3169 aa13.41□□□□□ -0.26
VPS25-201ENST00000253794 TMEM233B4DJY2 109 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 C4orf51C9J302 202 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 H0YIG0 161 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 STMND1H3BQB6 276 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 GALR3O60755 368 aaPredicted RBP13.4□□□□□ -0.26
VPS25-201ENST00000253794 ETHE1O95571 254 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 CHEK2O96017 543 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 CAPNS1P04632 268 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 ITGAXP20702 1163 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 RPL14P50914 215 aaKnown RBP13.4□□□□□ -0.26
VPS25-201ENST00000253794 HK2P52789 917 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 SNRPNP63162 240 aaKnown RBP13.4□□□□□ -0.26
VPS25-201ENST00000253794 SKP1P63208 163 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 TBC1D25Q3MII6 688 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 XKR7Q5GH72 579 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 TOR1AIP1Q5JTV8 583 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 TTLL10Q6ZVT0 673 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 UBE3DQ7Z6J8 389 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 RNF175Q8N4F7 328 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 C11orf24Q96F05 449 aaPredicted RBP13.4□□□□□ -0.26
VPS25-201ENST00000253794 METTL2AQ96IZ6 378 aaKnown RBP13.4□□□□□ -0.26
VPS25-201ENST00000253794 FAR2Q96K12 515 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 QRFPRQ96P65 431 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 KCNC2Q96PR1 638 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 TBCDQ9BTW9 1192 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 ZNF717Q9BY31 904 aaPredicted RBP13.4□□□□□ -0.26
VPS25-201ENST00000253794 ACPTQ9BZG2 426 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 SHCBP1LQ9BZQ2 653 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 ROGDIQ9GZN7 287 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 TUBB1Q9H4B7 451 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 KLHL31Q9H511 634 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 NMRK1Q9NWW6 199 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 IRAK4Q9NWZ3 460 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 SIRT5Q9NXA8 310 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 CDC14AQ9UNH5 594 aa13.4□□□□□ -0.26
VPS25-201ENST00000253794 SPTBP11277 2137 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 MED19A0JLT2 244 aaPredicted RBP13.39□□□□□ -0.27
VPS25-201ENST00000253794 MEN1O00255 615 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 CRCPO75575 148 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms