RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 PRSS53Q2L4Q9 553 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 COX20Q5RI15 118 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 C6orf141Q5SZD1 244 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 ERICH5Q6P6B1 374 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 NXPE4Q6UWF7 544 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 CBLL1Q75N03 491 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 CAMKMTQ7Z624 323 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 STARD8Q92502 1023 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 ITFG2Q969R8 447 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 REPS1Q96D71 796 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 WDR34Q96EX3 536 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 METTL2AQ96IZ6 378 aaKnown RBP17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 COG8Q96MW5 612 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 EFCAB11Q9BUY7 163 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 OR52A5Q9H2C5 316 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 THAP10Q9P2Z0 257 aaPredicted RBP17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 ACSL6Q9UKU0 697 aa17.95■□□□□ 0.46
PDLIM4-201ENST00000253754 TICRRQ7Z2Z1 1910 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 HTR1AP08908 422 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 WASP42768 502 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 DAPP51397 102 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 ISL1P61371 349 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 ZNF763Q0D2J5 394 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 EPS8Q12929 822 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 TMEM52BQ4KMG9 183 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 XAF1Q6GPH4 301 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 FAM180BQ6P0A1 224 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 HEATR4Q86WZ0 1026 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 LAS2Q8IYD9 372 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 PGBD3Q8N328 593 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 LINC00615Q96LM1 132 aaPredicted RBP17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 NECTIN4Q96NY8 510 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 RIBC2Q9H4K1 309 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 PRSS16Q9NQE7 514 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 GPATCH2Q9NW75 528 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 RPS6KA6Q9UK32 745 aa17.94■□□□□ 0.46
PDLIM4-201ENST00000253754 CPNE6O95741 557 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 C6orf47O95873 294 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 KLK1P06870 262 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 MATN1P21941 496 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 HTR4Q13639 388 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 RAPSNQ13702 412 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 SIM2Q14190 667 aaPredicted RBP17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 MPEG1Q2M385 716 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 ZNF691Q5VV52 312 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 BROXQ5VW32 411 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 GALNT18Q6P9A2 607 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 EIF3MQ7L2H7 374 aaKnown RBP17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 VPS37AQ8NEZ2 397 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.93■□□□□ 0.469e-16■■■■■ 46.4
PDLIM4-201ENST00000253754 CNIH3Q8TBE1 160 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 REEP4Q9H6H4 257 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 TM9SF3Q9HD45 589 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 PCM1Q15154 2024 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 IGLON5A6NGN9 336 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 BCKDKO14874 412 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 ETFAP13804 333 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 DCKP27707 260 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 GALK1P51570 392 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 TAS2R50P59544 299 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 PAGE2BQ5JRK9 111 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 RBM48Q5RL73 367 aaKnown RBP17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 ANXA8L1Q5VT79 327 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 NUDT18Q6ZVK8 323 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 VN1R5Q7Z5H4 357 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 HDAC2Q92769 488 aaKnown RBP17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 DPEP2Q9H4A9 486 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 ITM2CQ9NQX7 267 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 ORC6Q9Y5N6 252 aa17.93■□□□□ 0.46
PDLIM4-201ENST00000253754 C17orf113A0A1B0GUU1 675 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 FOXE1O00358 373 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 GCM2O75603 506 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 OPN1SWP03999 348 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 CRATP43155 626 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 COL19A1Q14993 1142 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 PRAMEF14Q5SWL7 426 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 PIP5KL1Q5T9C9 394 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 PRAMEF13Q5VWM6 474 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 HORMAD1Q86X24 394 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 OR5AK3PQ8NH89 298 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 C16orf78Q8WTQ4 265 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 ZNF514Q96K75 400 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 PAK1IP1Q9NWT1 392 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 PDP1Q9P0J1 537 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 CD207Q9UJ71 328 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 FAF1Q9UNN5 650 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 GPR34Q9UPC5 381 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 SAMHD1Q9Y3Z3 626 aaKnown RBP17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 DGKBQ9Y6T7 804 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 TMEM229AB2RXF0 380 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 RNASET2O00584 256 aaKnown RBP17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 FOXD2O60548 495 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 ABCB7O75027 752 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 FURINP09958 794 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 TNFRSF1BP20333 461 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 STT3AP46977 705 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 MVDP53602 400 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 RAD23AP54725 363 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 C2orf80Q0P641 193 aa17.92■□□□□ 0.46
PDLIM4-201ENST00000253754 HIST2H2ACQ16777 129 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms