RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 ART3Q13508 389 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 FRG1Q14331 258 aaKnown RBP19.8■□□□□ 0.76
NEDD8-201ENST00000250495 STEAP4Q687X5 459 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 TRMT10BQ6PF06 316 aaKnown RBP19.8■□□□□ 0.76
NEDD8-201ENST00000250495 TRPV3Q8NET8 790 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 ANKRD7Q92527 254 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 TSLPQ969D9 159 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 RUBCNLQ9H714 662 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 TRMT1Q9NXH9 659 aaKnown RBP19.8■□□□□ 0.76
NEDD8-201ENST00000250495 CRYBG3Q68DQ2 2970 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 CCL21O00585 134 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 EEF1DP29692 281 aaKnown RBP19.79■□□□□ 0.76
NEDD8-201ENST00000250495 CA7P43166 264 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 CASP6P55212 293 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 ARL4CP56559 192 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 SLC26A5P58743 744 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 PMP22Q01453 160 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 SRSF11Q05519 484 aaKnown RBP19.79■□□□□ 0.76
NEDD8-201ENST00000250495 OR1C1Q15619 314 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 KRTCAP3Q53RY4 240 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 SBSNQ6UWP8 590 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 THOC6Q86W42 341 aaKnown RBP19.79■□□□□ 0.76
NEDD8-201ENST00000250495 LGI4Q8N135 537 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 NKAPQ8N5F7 415 aaKnown RBP19.79■□□□□ 0.76
NEDD8-201ENST00000250495 TMEM178AQ8NBL3 297 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 MDS2Q8NDY4 140 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 MARVELD3Q96A59 401 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 PTCHD1Q96NR3 888 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 SIGLEC12Q96PQ1 595 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 AIF1LQ9BQI0 150 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 PELI2Q9HAT8 420 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 ZFATQ9P243 1243 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 KCNE2Q9Y6J6 123 aa19.79■□□□□ 0.76
NEDD8-201ENST00000250495 ARHGAP10A1A4S6 786 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 PRMT3O60678 531 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 B4GALT2O60909 372 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 ZNF888P0CJ79 500 aaPredicted RBP19.78■□□□□ 0.76
NEDD8-201ENST00000250495 SAT1P21673 171 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 OLR1P78380 273 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 DR1Q01658 176 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 OC90Q02509 493 aaPredicted RBP19.78■□□□□ 0.76
NEDD8-201ENST00000250495 SPINK14Q6IE38 97 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 NXPE4Q6UWF7 544 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 RPS19BP1Q86WX3 136 aaKnown RBP19.78■□□□□ 0.76
NEDD8-201ENST00000250495 KLHL7Q8IXQ5 586 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 ELP5Q8TE02 316 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 UTP15Q8TED0 518 aaKnown RBP19.78■□□□□ 0.76
NEDD8-201ENST00000250495 SCMH1Q96GD3 660 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 PWWP2AQ96N64 755 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 TSNARE1Q96NA8 513 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 NPAS2Q99743 824 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 SPNS1Q9H2V7 528 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 CDCP1Q9H5V8 836 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 KLHL1Q9NR64 748 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 ANKRD10Q9NXR5 420 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 SLC22A14Q9Y267 594 aa19.78■□□□□ 0.76
NEDD8-201ENST00000250495 KLF2Q9Y5W3 355 aaPredicted RBP19.78■□□□□ 0.76
NEDD8-201ENST00000250495 GABRR3A8MPY1 467 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 NDC80O14777 642 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 DNAJB6O75190 326 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 ZNF37AP17032 561 aaPredicted RBP19.77■□□□□ 0.76
NEDD8-201ENST00000250495 REEP5Q00765 189 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 ALDH6A1Q02252 535 aaKnown RBP19.77■□□□□ 0.76
NEDD8-201ENST00000250495 MGAT5Q09328 741 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 NAA30Q147X3 362 aaPredicted RBP19.77■□□□□ 0.76
NEDD8-201ENST00000250495 RBBP5Q15291 538 aaKnown RBP19.77■□□□□ 0.76
NEDD8-201ENST00000250495 RPTNQ6XPR3 784 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 QSOX2Q6ZRP7 698 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 MRGPRGQ86SM5 289 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 CYP4X1Q8N118 509 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 FAM98AQ8NCA5 519 aaKnown RBP19.77■□□□□ 0.76
NEDD8-201ENST00000250495 THAP3Q8WTV1 239 aaPredicted RBP19.77■□□□□ 0.76
NEDD8-201ENST00000250495 ITLN2Q8WWU7 325 aaPredicted RBP19.77■□□□□ 0.76
NEDD8-201ENST00000250495 CCDC120Q96HB5 630 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 SLC6A16Q9GZN6 736 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 IKZF3Q9UKT9 509 aa19.77■□□□□ 0.76
NEDD8-201ENST00000250495 ASPDHA6ND91 283 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 PSMD12O00232 456 aaPredicted RBP19.76■□□□□ 0.75
NEDD8-201ENST00000250495 MAN1A2O60476 641 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 SLC19A2O60779 497 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 B3GALT4O96024 378 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 HNF4AP41235 474 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 HNMTP50135 292 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 ITGA8P53708 1063 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 RAB8AP61006 207 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 CDKL1Q00532 357 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 PPP1R3AQ16821 1122 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 SLC25A25Q6KCM7 469 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 TMPRSS11BQ86T26 416 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 ZC3HC1Q86WB0 502 aaKnown RBP19.76■□□□□ 0.75
NEDD8-201ENST00000250495 ANKMY2Q8IV38 441 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 ZNF808Q8N4W9 903 aaPredicted RBP19.76■□□□□ 0.75
NEDD8-201ENST00000250495 VPS39Q96JC1 886 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 CAPZA3Q96KX2 299 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 EGFL8Q99944 293 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 WDR83Q9BRX9 315 aaKnown RBP19.76■□□□□ 0.75
NEDD8-201ENST00000250495 LRFN1Q9P244 771 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 SH3BGRL2Q9UJC5 107 aa19.76■□□□□ 0.75
NEDD8-201ENST00000250495 FAM95CA0A1B0GW59 222 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 FAM227AF5H4B4 570 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms