RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ZSCAN26Q16670 478 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 GALNTL6Q49A17 601 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 PERM1Q5SV97 790 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 TMTC4Q5T4D3 741 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 GARNL3Q5VVW2 1013 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 IL23RQ5VWK5 629 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 TMEM198Q66K66 360 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 CYB5D1Q6P9G0 228 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 PRR23CQ6ZRP0 262 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 IKBIPQ70UQ0 350 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 VN1R4Q7Z5H5 301 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 BPHLQ86WA6 291 aaPredicted RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 NAXDQ8IW45 347 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 FAM20CQ8IXL6 584 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 D2HGDHQ8N465 521 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 Q8N9G6 341 aaPredicted RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 OR2L5Q8NG80 312 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 RP9Q8TA86 221 aaKnown RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 GAL3ST3Q96A11 431 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 KCNC2Q96PR1 638 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 HBEGFQ99075 208 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 DDX31Q9H8H2 851 aaKnown RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 PRDM9Q9NQV7 894 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 BTBD3Q9Y2F9 522 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 PCDHGA1Q9Y5H4 931 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 SLC22A7Q9Y694 548 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 TP53BP1Q12888 1972 aaPredicted RBP12.34□□□□□ -0.43
LSM8-201ENST00000249299 H0YGG7 62 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 NDUFS4O43181 175 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 CBFA2T3O75081 653 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 GUCY1B2O75343 617 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 RASSF9O75901 435 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 ETHE1O95571 254 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 RPLP0P05388 317 aaKnown RBP12.34□□□□□ -0.43
LSM8-201ENST00000249299 THRAP10827 490 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 NELFEP18615 380 aaKnown RBP12.34□□□□□ -0.43
LSM8-201ENST00000249299 PRPS1L1P21108 318 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 GPX3P22352 226 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 TIA1P31483 386 aaKnown RBP eCLIP12.34□□□□□ -0.43
LSM8-201ENST00000249299 CSF2RBP32927 897 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 RASSF2P50749 326 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 RAP1GDS1P52306 607 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 CLNS1AP54105 237 aaKnown RBP12.34□□□□□ -0.43
LSM8-201ENST00000249299 GFERP55789 205 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 CLDN8P56748 225 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 ARF3P61204 181 aaPredicted RBP12.34□□□□□ -0.43
LSM8-201ENST00000249299 PPP1CAP62136 330 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 KLF10Q13118 480 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 DPY19L1Q2PZI1 675 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 AMZ1Q400G9 498 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 YOD1Q5VVQ6 348 aaPredicted RBP12.34□□□□□ -0.43
LSM8-201ENST00000249299 NKAIN2Q5VXU1 208 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 TRIM40Q6P9F5 258 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 CYP20A1Q6UW02 462 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 FAM92BQ6ZTR7 304 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 ABHD13Q7L211 337 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 COMMD6Q7Z4G1 85 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 ARHGAP22Q7Z5H3 698 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 GLRX5Q86SX6 157 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 MCATQ8IVS2 390 aaKnown RBP12.34□□□□□ -0.43
LSM8-201ENST00000249299 ZCCHC7Q8N3Z6 543 aaKnown RBP12.34□□□□□ -0.43
LSM8-201ENST00000249299 OR8K5Q8NH50 307 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 MS4A6EQ96DS6 147 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 APIPQ96GX9 242 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 ZNF764Q96H86 408 aaPredicted RBP12.34□□□□□ -0.43
LSM8-201ENST00000249299 CATSPER2Q96P56 530 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 GFM1Q96RP9 751 aaKnown RBP12.34□□□□□ -0.43
LSM8-201ENST00000249299 OR51B5Q9H339 312 aa12.34□□□□□ -0.43
LSM8-201ENST00000249299 TMEM131Q92545 1883 aa12.33□□□□□ -0.43
LSM8-201ENST00000249299 LAMA1P25391 3075 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 OTOGLQ3ZCN5 2332 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 WDFY4Q6ZS81 3184 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 PCM1Q15154 2024 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 VPS13AQ96RL7 3174 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 IGHV5-51A0A0C4DH38 117 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 A0A0J9YVX5 310 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 A0A1W2PQM1 296 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 FITM1A5D6W6 292 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 TMX2-CTNND1H3BSU7 103 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 ANKRD28O15084 1053 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 SLC22A3O75751 556 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 SMIM10L1P0DMW3 83 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 PVRP15151 417 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 CALB2P22676 271 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 BSGP35613 385 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 GABRA4P48169 554 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 PPM1FP49593 454 aaPredicted RBP12.33□□□□□ -0.44
LSM8-201ENST00000249299 ARL4DP49703 201 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 DIO3P55073 304 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 CCL7P80098 99 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 ACY1Q03154 408 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 ZNF763Q0D2J5 394 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 HYAL2Q12891 473 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 BNIP1Q12981 228 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 FAM53BQ14153 422 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 NDUFA9Q16795 377 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 PRTGQ2VWP7 1150 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 AASDHQ4L235 1098 aaPredicted RBP12.33□□□□□ -0.44
LSM8-201ENST00000249299 COQ5Q5HYK3 327 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 OR4C11Q6IEV9 310 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms