RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SGK494L7N484 410 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 FFAR3O14843 346 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 GPR42O15529 346 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 SLC28A2O43868 658 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 ZNF500O60304 480 aaPredicted RBP12.08□□□□□ -0.48
VPREB3-201ENST00000248948 CLEC3AO75596 197 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 PDGFAP04085 211 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 SERPIND1P05546 499 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 HEXBP07686 556 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 SNRPAP09012 282 aaKnown RBP12.08□□□□□ -0.48
VPREB3-201ENST00000248948 RBP1P09455 135 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 FAM153BP0C7A2 387 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 ZNF888P0CJ79 500 aaPredicted RBP12.08□□□□□ -0.48
VPREB3-201ENST00000248948 GFAPP14136 432 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 EPORP19235 508 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 NR1D1P20393 614 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 JAK1P23458 1154 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 SERPINB1P30740 379 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 CASRP41180 1078 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 CASP2P42575 452 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 XCR1P46094 333 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 GLRBP48167 497 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 KCNC1P48547 511 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 EMP2P54851 167 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 HYAL2Q12891 473 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 RBBP5Q15291 538 aaKnown RBP12.08□□□□□ -0.48
VPREB3-201ENST00000248948 SYT16Q17RD7 645 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 FAM153CQ494X1 144 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 FBXO48Q5FWF7 155 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 XKR6Q5GH73 641 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 GSPT2Q8IYD1 628 aaKnown RBP12.08□□□□□ -0.48
VPREB3-201ENST00000248948 PRSS58Q8IYP2 241 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 UTP15Q8TED0 518 aaKnown RBP12.08□□□□□ -0.48
VPREB3-201ENST00000248948 CREB3L4Q8TEY5 395 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 UBE2E3Q969T4 207 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 YIPF2Q9BWQ6 316 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 PPCSQ9HAB8 311 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 RIC8BQ9NVN3 520 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 HCN3Q9P1Z3 774 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 C19orf25Q9UFG5 118 aaPredicted RBP12.08□□□□□ -0.48
VPREB3-201ENST00000248948 ASB1Q9Y576 335 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 TNPO3Q9Y5L0 923 aaKnown RBP12.08□□□□□ -0.48
VPREB3-201ENST00000248948 BAHCC1Q9P281 2608 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 A0A088AWK7 358 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 K7EM74 188 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 UGDHO60701 494 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 DPM1O60762 260 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 UBR5O95071 2799 aaPredicted RBP12.07□□□□□ -0.48
VPREB3-201ENST00000248948 C8orf89P0DMQ9 161 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 COX6A1P12074 109 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 EPB42P16452 691 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 CD22P20273 847 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 ZNF10P21506 573 aaPredicted RBP12.07□□□□□ -0.48
VPREB3-201ENST00000248948 GCAP28676 217 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 AGTR2P50052 363 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 AP2B1P63010 937 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 IRF8Q02556 426 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 DOC2AQ14183 400 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 PCBP2Q15366 365 aaKnown RBP eCLIP12.07□□□□□ -0.48
VPREB3-201ENST00000248948 ADPRMQ3LIE5 342 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 DEFB134Q4QY38 66 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 IRAK1BP1Q5VVH5 260 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 GRHL2Q6ISB3 625 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 ADGRD1Q6QNK2 874 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 TMEM205Q6UW68 189 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 TIFABQ6ZNK6 161 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 UHMK1Q8TAS1 419 aaKnown RBP12.07□□□□□ -0.48
VPREB3-201ENST00000248948 TM9SF4Q92544 642 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 ESAMQ96AP7 390 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 VN1R1Q9GZP7 353 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 RHBGQ9H310 441 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 EPB41L4BQ9H329 900 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 PSMC3IPQ9P2W1 217 aaPredicted RBP12.07□□□□□ -0.48
VPREB3-201ENST00000248948 XPR1Q9UBH6 696 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 MKL2Q9ULH7 1088 aa12.07□□□□□ -0.48
VPREB3-201ENST00000248948 IGHV1-45A0A0A0MS14 117 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 NSG1A0A0A6YYJ2 146 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 IQANK1A0A1B0GTG1 560 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 ZNF860A6NHJ4 632 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 ANKDD1BA6NHY2 528 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 STX16-NPEPL1H3BU86 382 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 STX16O14662 325 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 PRAMEF4O60810 478 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 ALOX12BO75342 701 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 WFS1O76024 890 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 SMIM10L1P0DMW3 83 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 MYBL2P10244 700 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 ITGA3P26006 1051 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 EFNA3P52797 238 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 CHIT1Q13231 466 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 SLC29A2Q14542 456 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 HIST2H2ACQ16777 129 aaPredicted RBP12.06□□□□□ -0.48
VPREB3-201ENST00000248948 PFKFB4Q16877 469 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 MINDY4Q4G0A6 757 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 TOR1AIP1Q5JTV8 583 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 PRAMEF9Q5VWM5 478 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 HIST2H2AA3Q6FI13 130 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 TRIM40Q6P9F5 258 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 IGFL3Q6UXB1 125 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 NDUFAF7Q7L592 441 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms